Related Experiment Video
Updated: Jan 10, 2026

08:31
Characterizing DNA Repair Processes at Transient and Long-lasting Double-strand DNA Breaks by Immunofluorescence Microscopy
Published on: June 8, 2018
9.6K
Repair of Single-Stranded Breaks in Hyperthermophilic DNA.
1Department of Chemistry, New York University, 31 Washington Place, New York, NY 10003, USA.
Journal of Molecular Biology
|November 28, 2025
Summary
Hyperthermophiles face DNA denaturation above 95°C. Reverse gyrase repairs DNA nicks, restoring the double helix and linking number essential for survival at extreme temperatures.
Area of Science:
- Microbiology
- Molecular Biology
- Biochemistry
Background:
- Hyperthermophiles thrive above 95°C, facing DNA denaturation challenges.
- High temperatures cause DNA strand separation, compromising the double-helical structure.
- Closed circular DNA offers some protection, but single-stranded nicks disrupt this stability.
Purpose of the Study:
- To review the problem of DNA denaturation in hyperthermophiles.
- To explain the role of DNA conformation in thermal stability.
- To highlight the function of reverse gyrase in DNA repair.
Main Methods:
- Review of existing literature on hyperthermophile DNA stability.
- Analysis of DNA denaturation mechanisms at high temperatures.
- Examination of the enzymatic activity of reverse gyrase.
Main Results:
- Linear and open circular DNA denature readily above 95°C.
- Single-stranded nicks in circular DNA lead to unwinding and partial denaturation.
- DNA-bound proteins offer limited protection against denaturation.
- Reverse gyrase catalyzes positive supercoiling, essential for repairing nicks and restoring DNA integrity.
Conclusions:
- Reverse gyrase is crucial for hyperthermophile survival by maintaining DNA integrity.
- The enzyme's activity ensures restoration of both strand integrity and topological linking number.
- Understanding reverse gyrase function is key to comprehending DNA repair in extreme environments.
Related Concept Videos
Homologous Recombination
62.4K
The basic reaction of homologous recombination (HR) involves two chromatids that contain DNA sequences sharing a significant stretch of identity. One of these sequences uses a strand from another as a template to synthesize DNA in an enzyme-catalyzed reaction. The final product is a novel amalgamation of the two substrates. To ensure an accurate recombination of sequences, HR is restricted to the S and G2 phases of the cell cycle. At these stages, the DNA has been replicated already and the...
62.4K
Homologous Recombination
6.0K
6.0K
Fixing Double-strand Breaks
14.2K
The double-stranded structure of DNA has two major advantages. First, it serves as a safe repository of genetic information where one strand serves as the back-up in case the other strand is damaged. Second, the double-helical structure can be wrapped around proteins called histones to form nucleosomes, which can then be tightly wound to form chromosomes. This way, DNA chains up to 2 inches long can be contained within microscopic structures in a cell. A double-stranded break not only damages...
14.2K
Fixing Double-strand Breaks
4.2K
4.2K
Base Excision Repair
25.9K
One of the common DNA damages is the chemical alteration of single bases by alkylation, oxidation, or deamination. The altered bases cause mispairing and strand breakage during replication. This type of damage causes minimal change to the DNA double helix structure and can be repaired by the base excision repair (BER) pathways. BER corrects damaged DNA sequences by removing the damaged base and restoring the original base sequence using the complementary strand as a template.
The first step of...
The first step of...
25.9K
Nucleotide Excision Repair
40.5K
Overview
40.5K

