Development of a machine learning-based model for prognostic prediction in melanoma
Enbo Hu1,2, Mengnan Tai2,3, Zixuan Nie3
1School of Electronic Information, Hunan First Normal University, Changsha , 410205, China.
Scientific Reports
|November 29, 2025
Summary
Machine learning models predict melanoma survival rates. The CatBoost model showed superior accuracy for 1-, 3-, and 5-year survival predictions, aiding clinical decisions.
Area of Science:
- Oncology
- Bioinformatics
- Machine Learning
Background:
- Melanoma is an aggressive skin cancer with a poor prognosis, making survival prediction critical.
- Accurate prognostic tools are needed to support clinical decision-making and improve patient outcomes.
Purpose of the Study:
- To apply and evaluate five machine learning models for predicting melanoma patient survival rates.
- To identify the most accurate model for improving prognostic assessment and clinical utility.
Main Methods:
- Utilized data from 4,875 cutaneous melanoma patients from the SEER database.
- Applied and compared Random Forest, Decision Tree, XGBoost, CatBoost, and LightGBM models.
- Evaluated model performance using Area Under the ROC Curve (AUC), confusion matrix, calibration curves, and Decision Curve Analysis (DCA).
Main Results:
- The CatBoost model demonstrated the best performance and stability across 1-, 3-, and 5-year survival predictions.
- Achieved AUC values of 0.7577, 0.7595, and 0.7557 for 1-, 3-, and 5-year survival, respectively.
- Decision Curve Analysis confirmed the clinical utility of the CatBoost model.
Conclusions:
- The CatBoost model is a practical and accurate tool for melanoma prognosis assessment.
- This machine learning approach supports individualized clinical decision-making and may enhance early intervention strategies.
- The model's robust generalization capabilities offer reliable predictive insights for melanoma patient survival.
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