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Updated: Jan 9, 2026

Time-Lapse Imaging of Neuronal Arborization using Sparse Adeno-Associated Virus Labeling of Genetically Targeted Retinal Cell Populations
Published on: March 19, 2021
Rapid neonatal AAV delivery for adult cortical two-photon imaging of genetically encoded sensors
Stephen Wisser1,2, Ethan B Blackwood1,2, Kallol Bera3,4
1Department of Anesthesiology and Critical Care, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Abstract:
Elucidating the mechanisms of the central nervous system necessitates the ability to precisely visualize, record, and manipulate specific neuronal populations within the living brain. Here, we report a fast and efficient technique for delivering adeno-associated virus (AAV) in neonatal pups for the robust co-expression of reporters and sensors in cortical neuronal subpopulations under different promoters and transgenic mouse lines. This approach has lower training requirements than adult AAV injections, and it enables a 40- to 50-fold increase in injection throughput per animal with high reproducibility. Pup-injected adult mice show reduced signals of neuroinflammation compared to adult-injected mice. Importantly, adult pup-injected mice have stable and high expression of multiple AAVs suitable for structure-function two-photon imaging in local cortical circuits of awake, behaving adult animals. This approach offers a fast, efficient, and robust method of introducing multiple AAVs for investigating neuronal structure and function in defined cortical neuronal populations in the living brain.

