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Leaf ionome signatures as drought tolerance indicators in chilli.
Muddarsu Venkata Ramana1,2, Subramanian Manivannan1,3, Sujata Upadhyay1
1Department of Horticulture, Sikkim University, Gangtok, India.
Frontiers in Plant Science
|December 1, 2025
Summary
Chilli cultivation faces drought challenges. Ionomics identified specific ion accumulation in leaves as key markers for drought tolerance, aiding in developing hardier chilli varieties.
Area of Science:
- Agricultural Science
- Plant Physiology
- Biochemistry
Background:
- Chilli (Capsicum annuum L.) cultivation is limited by water availability in warm, semi-arid regions.
- Drought stress significantly constrains chilli production, necessitating drought-tolerant varieties.
- Understanding plant responses to water deficit is crucial for crop improvement.
Purpose of the Study:
- To investigate the potential of ionomics in identifying drought tolerance mechanisms in chilli.
- To profile the leaf ionome of different chilli cultivars under drought conditions.
- To correlate ionome profiles with morpho-physiological and biochemical traits for drought tolerance markers.
Main Methods:
- Leaf ionome profiling using Inductively Coupled Plasma Mass Spectrometry (ICP-MS).
- Integration of ionomic data with morpho-physiological and biochemical characteristics.
- Application of principal component and correlation analyses to identify drought tolerance signatures.
Main Results:
- Specific ion accumulation (Ca, Cu, Mg, Fe, Mn, Mo, Ni, Sn) in leaves was identified as a signature of drought tolerance.
- Ionomic profiling revealed distinct patterns correlating with varying levels of drought tolerance across eight cultivars.
- The study successfully identified ionome markers indicative of drought tolerance in chilli.
Conclusions:
- Ionomics provides a simple, efficient, and high-throughput method for identifying drought-tolerant chilli genotypes.
- The identified ion markers can be utilized in pre-breeding programs for crop improvement.
- This approach facilitates the selection of superior drought-tolerant chilli cultivars for enhanced agricultural sustainability.
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