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Updated: Jan 9, 2026

Capturing Actively Produced Microbial Volatile Organic Compounds from Human-Associated Samples with Vacuum-Assisted Sorbent Extraction
Published on: June 1, 2022
Irritable bowel syndrome-specific volatile organic compounds in faecal headspace do not associate with classical
Robert van Vorstenbosch1,2,3, Michal Skawinski2,3, Daisy M A E Jonkers3,4
1Institute of Risk Assessment Sciences, Population Health Sciences, Utrecht University, Utrecht, The Netherlands.
Researchers identified specific volatile organic compounds (VOCs) in stool to distinguish Irritable Bowel Syndrome (IBS) patients from healthy individuals. However, these metabolic signatures did not align with current IBS subtypes based on stool patterns.
Area of Science:
- Gastroenterology and Metabolism
- Microbiome Research
- Biomarker Discovery
Background:
- Irritable Bowel Syndrome (IBS) is a gut-brain interaction disorder diagnosed via symptom-based Rome criteria, which categorize patients into subtypes based on stool patterns.
- The biological basis for these current IBS subtypes remains unclear, necessitating novel approaches to understand disease heterogeneity.
- Faecal volatile organic compounds (VOCs) offer a window into gut microbial and host intestinal processes, potentially revealing pathophysiological differences in IBS.
Purpose of the Study:
- To investigate whether faecal VOC profiles can differentiate IBS patients from healthy controls.
- To explore the association between faecal VOC profiles and existing Rome III-based IBS subtypes.
- To assess the potential of VOC analysis as a non-invasive tool for IBS characterization.
Main Methods:
- Faecal headspace VOCs were profiled in 164 IBS patients and 143 healthy controls using gas chromatography-mass spectrometry.
- Random forest models were used for data imputation and to identify discriminatory VOCs.
- Partial least squares regression corrected for faecal water content, and regularized MANOVA evaluated associations with Rome III subtypes.
Main Results:
- A total of 39 VOCs were significantly altered in IBS patients compared to controls.
- A classification model achieved an area under the curve of 0.82, demonstrating robust separation between IBS patients and healthy individuals.
- No significant association was found between faecal VOC profiles and the Rome III-based IBS subtypes.
Conclusions:
- Faecal VOC profiling is a promising non-invasive method for studying IBS and distinguishing patients from healthy individuals.
- Current stool-based IBS subtyping lacks a clear metabolic basis, as indicated by the lack of association with VOC profiles.
- Future research should integrate VOC analysis with other omics data to develop biologically relevant IBS classifications for personalized therapies.
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