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From Embeddings to Accuracy: Comparing Foundation Models for Radiographic Classification
Xue Li1, Jameson Merkow2, Noel C F Codella2
1Department of Radiology, University of Wisconsin-Madison, Madison, WI, USA. xue.li@wisc.edu.
Journal of Imaging Informatics in Medicine
|December 2, 2025
Summary
Foundation models provide transferable embeddings for medical imaging. MedImageInsight embeddings with adapter models achieved high accuracy in radiography classification, outperforming traditional methods and showing computational efficiency and fairness.
Area of Science:
- Artificial Intelligence
- Medical Imaging
- Machine Learning
Background:
- Foundation models offer robust, transferable embeddings for machine learning tasks.
- These embeddings are applicable to diverse domains, including medical imaging diagnostics.
- Lightweight adapter models can leverage these embeddings for efficient model training.
Purpose of the Study:
- To evaluate foundation model-derived embeddings for training lightweight adapter models in multi-class radiography classification.
- To compare the performance of adapter models against end-to-end training of a convolutional neural network.
- To assess the computational efficiency and fairness of the adapter models.
Main Methods:
- Extracted embeddings from seven foundation models (DenseNet121, BiomedCLIP, Med-Flamingo, MedImageInsight, MedSigLIP, Rad-DINO, CXR-Foundation) using 8842 radiographs.
- Trained adapter models (KNN, LR, SVM, RF, MLP) using these embeddings for classification.
- Compared performance using mean area under the curve (mAUC) and conducted Wilcoxon signed-rank tests and fairness analyses.
Main Results:
- MedImageInsight embeddings with SVM or MLP adapters achieved the highest mAUC (93.1%), surpassing a fully finetuned DenseNet121 (87.2%).
- Most adapter models demonstrated computational efficiency, training in minutes and inferring in seconds on CPU.
- Fairness analysis showed minimal performance disparities across gender and age groups.
Conclusions:
- Foundation model embeddings, particularly from MedImageInsight, enable accurate, efficient, and equitable radiographic diagnostic classification via lightweight adapters.
- This approach offers a practical alternative to computationally intensive end-to-end training for clinical applications.
- The study confirms the utility of foundation model embeddings for developing high-performing and fair medical imaging AI tools.
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