Genetic diversity and molecular evolution of 3-carboxymuconate cyclase (Gp60-70), the major antigen in pathogenic

Jamile Ambrósio de Carvalho1, Thiago Costa Machado1,2, Alexandre Augusto Sasaki1

  • 1Laboratory of Emerging Fungal Pathogens, Department of Microbiology, Immunology, and Parasitology, Discipline of Cellular Biology, Federal University of São Paulo (UNIFESP), São Paulo, Brazil.

Mycology
|December 3, 2025
PubMed

Insights

The 3-carboxymuconate cyclase (CMC) gene is a powerful new marker for tracking Sporothrix fungal diversity and evolution. Its genetic variations offer insights into sporotrichosis virulence and disease control strategies.

Area of Science:

  • Medical Mycology
  • Molecular Evolution
  • Fungal Pathogenesis

Background:

  • Sporotrichosis is a neglected tropical disease caused by Sporothrix fungi, with increasing concern over virulent strains like S. brasiliensis.
  • Effective control of sporotrichosis relies on rapid diagnosis and robust surveillance systems.
  • Understanding the genetic diversity and evolutionary dynamics of Sporothrix species is crucial for disease management.

Purpose of the Study:

  • To evaluate the 3-carboxymuconate cyclase (CMC) gene as a molecular marker for Sporothrix species.
  • To analyze the genetic diversity and evolutionary patterns within pathogenic Sporothrix isolates.
  • To identify potential virulence factors and targets for diagnostics and therapeutics.

Main Methods:

  • Sequencing and haplotype analysis of the CMC gene from 104 Sporothrix isolates (S. brasiliensis, S. schenckii, S. globosa, S. luriei).
  • Comparative analysis of CMC gene polymorphisms and chromosomal location across different species.
  • Identification of conserved B-cell epitopes and N-linked glycosylation sequons within the CMC protein.

Main Results:

  • The CMC gene exhibited high discriminatory power, revealing 79 unique haplotypes, surpassing traditional markers.
  • Significant CMC polymorphisms in S. brasiliensis and S. schenckii suggest recent population expansion or positive selection.
  • Conserved chromosomal location of CMC in pathogenic species and presence of conserved glycosylation sites indicate potential roles in virulence and adaptation.

Conclusions:

  • The CMC gene is a valuable molecular marker for studying Sporothrix evolution, population dynamics, and genetic diversity.
  • CMC polymorphisms and conserved features provide insights into Sporothrix pathogenicity and adaptation.
  • This research aids in developing improved diagnostics and therapeutics for sporotrichosis control.

Related Concept Videos

Fungal Phylum Microsporidia01:28

Fungal Phylum Microsporidia

Microsporidia are a group of obligate intracellular fungi that were initially classified as protists but were later reclassified based on phylogenetic, molecular, and structural evidence linking them to the Chytridiomycota. These unicellular, non-motile organisms are highly specialized parasites that infect a wide range of animal hosts, including humans. They have evolved extensive genomic and metabolic reductions, making them highly dependent on their hosts for survival.Morphology and Genomic...
367
Modern Molecular Taxonomy01:29

Modern Molecular Taxonomy

Advancements in molecular biology have revolutionized the identification and characterization of bacteria, with multiple methods leveraging DNA sequencing for enhanced precision. As sequencing technologies improve and costs decline, these approaches are increasingly used in clinical, environmental, and evolutionary studies.Multilocus Sequence Typing (MLST) examines several housekeeping genes, essential chromosomal genes encoding cellular functions, to distinguish strains. Approximately...
536
Mutations in Microorganisms01:18

Mutations in Microorganisms

Mutations are heritable changes in an organism’s genome involving alterations in the base sequence of DNA or RNA. These changes can influence cellular processes and phenotypic traits, potentially transforming the unaltered wild type into a mutant form. Such changes, termed forward mutations, are pivotal in shaping the genetic diversity of organisms.RNA viruses exhibit the highest mutation rates due to the absence of robust proofreading mechanisms during genome replication. In contrast,...
466