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Author Spotlight: Unveiling the Role of TMOD3 in Platinum Resistance and Immune Infiltration in Ovarian Cancer
Published on: August 2, 2024
Multi-omics analysis reveals that ALYREF-mediated m5C modification promotes platinum resistance in ovarian cancer via
Shimin Yang1,2, Pengyuan He2, Wei Wang2,3
1Department of Obstetrics and Gynecology, Peking University People's Hospital, Beijing, China.
Abstract:
Platinum resistance remains a major obstacle to effective treatment and improved prognosis in ovarian cancer. Although 5-methylcytosine (m5C) RNA modification has been implicated in chemoresistance, its precise functional role in ovarian cancer remains unclear. In this study, we integrated RNA-Seq and single-cell transcriptomic data from cisplatin-resistant ovarian cancer cell lines and patient samples, identifying the m5C reader protein ALYREF as a key regulator of platinum resistance. Functional studies using ALYREF and NSUN2 knockdown, overexpression, and mutant constructs-combined with multi-omics analyses (RNA-Seq, m5C-BIS-Seq, and RIP-Seq)-revealed that ALYREF binds to m5C-modified LGR4 mRNA, enhancing its stability and promoting activation of the Wnt/β-catenin signaling pathway. Critically, this regulatory mechanism is dependent on NSUN2-mediated m5C modification of LGR4 mRNA. Together, our findings demonstrate that the NSUN2/ALYREF/LGR4 axis mediates platinum resistance through m5C-dependent stabilization of LGR4 and downstream Wnt signaling activation. Thus, targeting ALYREF may represent a promising strategy to overcome platinum resistance in ovarian cancer.
Insights
Platinum resistance in ovarian cancer is linked to RNA modification. The study identifies ALYREF as a key regulator, showing the NSUN2/ALYREF/LGR4 pathway drives resistance by stabilizing LGR4 mRNA and activating Wnt signaling.
Area of Science:
- Oncology
- Molecular Biology
- Epigenetics
Background:
- Platinum resistance is a significant challenge in ovarian cancer treatment.
- The role of 5-methylcytosine (m5C) RNA modification in chemoresistance is emerging but not fully understood in this context.
Purpose of the Study:
- To elucidate the functional role of m5C RNA modification and its associated proteins in platinum resistance in ovarian cancer.
- To identify key molecular regulators driving platinum resistance.
Main Methods:
- Integrated analysis of RNA-Seq and single-cell transcriptomic data from cisplatin-resistant ovarian cancer cells and patient samples.
- Functional studies involving knockdown, overexpression, and mutant constructs of ALYREF and NSUN2.
- Multi-omics analyses including RNA-Seq, m5C-BIS-Seq, and RIP-Seq.
Main Results:
- The m5C reader protein ALYREF was identified as a key regulator of platinum resistance.
- ALYREF binds to m5C-modified LGR4 mRNA, increasing its stability.
- This interaction activates the Wnt/β-catenin signaling pathway, a mechanism dependent on NSUN2-mediated m5C modification of LGR4 mRNA.
Conclusions:
- The NSUN2/ALYREF/LGR4 axis drives platinum resistance in ovarian cancer via m5C-dependent LGR4 mRNA stabilization and Wnt signaling activation.
- Targeting ALYREF presents a potential therapeutic strategy to overcome platinum resistance in ovarian cancer.
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