Related Experiment Video

Updated: Jan 9, 2026

Heuristic Mining of Hierarchical Genotypes and Accessory Genome Loci in Bacterial Populations
08:03

Heuristic Mining of Hierarchical Genotypes and Accessory Genome Loci in Bacterial Populations

Published on: December 7, 2021

2.7K

GeDi: simplifying gene set distances for enhanced omics interpretation in R/Bioconductor

Annekathrin Silvia Nedwed1, Arsenij Ustjanzew2, Najla Abassi2

  • 1Institute of Medical Biostatistics, Epidemiology and Informatics (IMBEI), University Medical Center of the Johannes Gutenberg University, Mainz, Germany. annekathrin.nedwed@gmail.com.

BMC Bioinformatics
|December 7, 2025
PubMed
Summary

No abstract available in PubMed .

Keywords:
Data interpretationData visualisationFunctional enrichment analysisR packageRNA-sequencingShiny

More Related Videos

Using Human Differentially Expressed Gene Lists to Perform Downstream Pathway Enrichment Analysis and Target Prioritization
03:08

Using Human Differentially Expressed Gene Lists to Perform Downstream Pathway Enrichment Analysis and Target Prioritization

Published on: October 3, 2025

879
Mapping the Structure-Function Relationships of Disordered Oncogenic Transcription Factors Using Transcriptomic Analysis
09:58

Mapping the Structure-Function Relationships of Disordered Oncogenic Transcription Factors Using Transcriptomic Analysis

Published on: June 27, 2020

3.1K

Related Experiment Videos

Last Updated: Jan 9, 2026

Heuristic Mining of Hierarchical Genotypes and Accessory Genome Loci in Bacterial Populations
08:03

Heuristic Mining of Hierarchical Genotypes and Accessory Genome Loci in Bacterial Populations

Published on: December 7, 2021

2.7K
Using Human Differentially Expressed Gene Lists to Perform Downstream Pathway Enrichment Analysis and Target Prioritization
03:08

Using Human Differentially Expressed Gene Lists to Perform Downstream Pathway Enrichment Analysis and Target Prioritization

Published on: October 3, 2025

879
Mapping the Structure-Function Relationships of Disordered Oncogenic Transcription Factors Using Transcriptomic Analysis
09:58

Mapping the Structure-Function Relationships of Disordered Oncogenic Transcription Factors Using Transcriptomic Analysis

Published on: June 27, 2020

3.1K

Related Concept Videos

Evolutionary Relationships through Genome Comparisons02:54

Evolutionary Relationships through Genome Comparisons

6.8K
Genome comparison is one of the excellent ways to interpret the evolutionary relationships between organisms. The basic principle of genome comparison is that if two species share a common feature, it is likely encoded by the DNA sequence conserved between both species. The advent of genome sequencing technologies in the late 20th century enabled scientists to understand the concept of conservation of domains between species and helped them to deduce evolutionary relationships across diverse...
6.8K

Articles linked to this work by shared authors, journal, and citation graph.

Comparison of spectral imaging modalities for identification and classification of air-liquid interface biofilms.

Talanta·2026

Anisometropia and Its Related Traits: Ocular, Systemic, and Genetic Characteristics-Results From the Gutenberg Health Study.

Investigative ophthalmology & visual science·2026

Genome-wide discovery reveals 30 loci for choroidal thickness and uncovers potential causal links with angle-closure glaucoma.

medRxiv : the preprint server for health sciences·2026

Non-destructive forensic identification and quantification of cocaine through sealed packaging using FT-NIR spectroscopy and hyperspectral imaging.

Analytica chimica acta·2026

Type I interferon-activated NK cells control polycythemia vera in vivo.

Blood·2026

TGF-β1 and TGF-β2 family members differentially modulate tumor initiation and invasiveness of primary liver cancer in a MMP14-dependent manner.

Carcinogenesis·2026

Introducing GalaxyR: an easy-to-use R implementation of the Galaxy API.

BMC bioinformatics·2026

Machine learning-based prediction of SARS-CoV-2 bioactivity: integrating IC50 regression and activity classification using multi-task neural networks.

BMC bioinformatics·2026

Residual-stream geometry of single-cell foundation models carries incremental gene-regulatory signal across tissues.

BMC bioinformatics·2026

Mol2Image: an enhanced DDI prediction framework leveraging drug molecular descriptors.

BMC bioinformatics·2026

Interpretable prediction of DNA replication origins in S. cerevisiae using DNABERT and DNABERT-2.

BMC bioinformatics·2026

Bayesian brain edge-based connectivity (BBeC): a Bayesian model for brain edge-based connectivity inference.

BMC bioinformatics·2026

Correction: Predictive modeling of gene expression and localization of DNA binding site using deep convolutional neural networks.

PLoS computational biology·2026

Characterizing and mitigating cross-library PCR chimeras in Perturb-seq using Perturb-Audit.

Blood science (Baltimore, Md.)·2026

Deep Learning-Based Multimodal Fusion of Whole-Slide Images and RNA Sequencing Identifies Survival-Relevant Glioblastoma Clusters.

Cancer medicine·2026

Integrated inference of cellular compositions and gene expression programs by deconvolution.

Cell regeneration (London, England)·2026

A Deep Learning Model for Prediction of Unknown Gene Functionality: Gene Bio-BERT.

Proteomics·2026

Integrating Complete Blood Count Parameters with Demographic Characteristics for Obstructive Sleep Apnea Prediction in Chinese Adults: A Machine Learning Approach.

Nature and science of sleep·2026
See all related articles
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies
Jove
Visualize
Contact Us