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A Method to Study the C924T Polymorphism of the Thromboxane A2 Receptor Gene
Published on: April 1, 2019
Association of PLA2G2A single nucleotide polymorphism and cardiometabolic diseases in an HIV-infected population
Elvis Ngwa Ndonwi1,2, Unati Nqebelele3, Tandi Edith Matsha1,4
1South African Medical Research Council/Cape Peninsula University of Technology, Cardiometabolic Health Research Unit, Department of Biomedical Sciences, Faculty of Health and Wellness Sciences, Cape Peninsula University of Technology, Cape Town, Western Cape 7535, South Africa.
Insights
Single nucleotide polymorphisms in the phospholipase A2 (PLA2) gene are linked to cardiometabolic diseases (CMDs). This study explored PLA2 gene SNPs and CMDs in South African HIV-infected individuals, finding potential utility for PLA2G2A in risk assessment.
Area of Science:
- Genetics and Genomics
- Cardiology
- Infectious Diseases
Background:
- Single nucleotide polymorphisms (SNPs) in the phospholipase A2 (PLA2) gene are associated with cardiometabolic diseases (CMDs).
- Associations between PLA2 gene SNPs and CMDs have not been established in HIV-infected African populations.
- This study investigated these associations in a South African HIV-infected cohort.
Purpose of the Study:
- To investigate the association between PLA2 gene single nucleotide polymorphisms (SNPs) and cardiometabolic diseases (CMDs) in a South African human immunodeficiency virus (HIV)-infected population.
Main Methods:
- Cross-sectional study of 716 HIV-infected participants from Cape Town, South Africa.
- Assessment of Hardy-Weinberg equilibrium (HWE) for investigated SNPs.
- Comparison of CMDs across genotypes using linear and logistic regression, adjusted for age and sex.
Main Results:
- SNP rs4744 genotypes (GG dominant, AA recessive) were in HWE.
- The rs4744 dominant genotype was associated with higher high-density lipoprotein-cholesterol (HDL-C) and BMI ≥30 kg/m².
- The rs4744 recessive genotype was linked to dyslipidemia (low HDL-C) and metabolic syndrome (MetS).
Conclusions:
- The phospholipase A2 group IIA (PLA2G2A) gene shows potential utility for assessing cardiometabolic disease risk.
- This is particularly relevant for African individuals living with HIV.
- PLA2G2A may serve as a biomarker for CMD risk stratification in this population.
Abstract:
While single nucleotide polymorphisms (SNPs) of the phospholipase A2 (PLA2) gene have been associated with cardiometabolic diseases (CMDs), such associations are yet to be demonstrated in a human immunodeficiency virus (HIV)-infected African population. Therefore, the association between SNPs of the PLA2 gene and CMDs in a South African population with HIV was investigated. This cross-sectional study included 716 participants recruited from HIV clinics in Cape Town, South Africa. Hardy-Weinberg equilibrium (HWE) was assessed for the SNPs investigated. CMDs were compared across the genotypes of the SNPs in HWE. Linear and logistic regression analyses, adjusting for age and sex were used to assess the risk of CMDs across the genotypes. Among the SNPs investigated, rs4744 with GG (dominant) and AA (recessive) genotypes were in HWE (P=0.998). High-density lipoprotein-cholesterol (HDL-C; P=0.044) and a BMI ≥30 kg/m2 (P=0.037) were significantly higher in participants with the dominant genotype compared with those with the recessive genotype of the rs4744 SNP. Moreover, the rs4744 recessive genotype was associated with dyslipidemia characterized by low HDL-C in linear regression (β=0.366; P=0.024) and logistic regression (OR=0.19; P=0.049), and also associated with MetS in logistic regression (OR=0.14; P=0.036). In conclusion, the phospholipase A2 group IIA (PLA2G2A) gene has a potential utility for CMD risk assessment in African individuals with HIV.
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