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Updated: Jan 9, 2026

Microvascular Embolism Mouse Model for In Vivo Two-photon Microscopy Using Fluorescent Polystyrene Microspheres
Published on: November 21, 2025
Microvascular Embolism Mouse Model for In Vivo Two-photon Microscopy Using Fluorescent Polystyrene Microspheres
Kevin Mol1, Judith de Vos1, Sanne Kok2
1Biomedical Engineering and Physics, Amsterdam University Medical Center, University of Amsterdam; Amsterdam Neuroscience, neurovascular disorders; Amsterdam Cardiovascular Sciences.
Abstract:
Microvascular occlusions in the brain are relatively common but remain largely understudied. The event rate, long-term consequences, and potential clearing mechanisms are largely unknown. Current models used to study these events, such as photothrombosis and micro-emboli injection, each have their own advantages and limitations. This study developed a detailed protocol that combines the preparation of a chronic cranial window with the induction of cerebral microvascular embolisms via intra-arterial injection of microspheres in mice. This setup allows for long-term in vivo imaging of the micro-vasculature and micro-occlusions using two-photon microscopy. Microspheres are delivered through a catheter placed in the external carotid artery (ECA), which is permanently ligated. Importantly, the common carotid artery (CCA) and internal carotid artery (ICA) remain intact throughout and after the procedure, thereby minimizing disturbance to cerebral blood flow. To facilitate immediate in vivo imaging and prevent microsphere clustering or adhesion to pipette tips and the catheter, microspheres are suspended in a mixture of FITC-Dextran and 0.1% Tween 20. The injection technique was validated using post mortem in situ 3D imaging to determine the microspheres' distribution. This study further demonstrates its utility with an in vivo two-photon microscopy example. This approach provides a consistent and robust method for inducing and studying microvascular embolisms, enabling investigation of their impact and clearance dynamics using high-resolution in vivo imaging.
Insights
Researchers developed a new method to study brain microvascular occlusions in mice using advanced imaging. This technique allows for long-term observation of these events and their impact on brain blood flow.
Area of Science:
- Neuroscience
- Cerebrovascular Research
- Medical Imaging
Background:
- Brain microvascular occlusions are common yet poorly understood.
- Existing study models have limitations.
- Long-term consequences and clearance mechanisms are unknown.
Purpose of the Study:
- To develop a robust method for inducing and studying cerebral microvascular embolisms in vivo.
- To enable long-term, high-resolution imaging of micro-occlusions.
- To investigate the impact and clearance dynamics of these events.
Main Methods:
- Developed a protocol combining chronic cranial window preparation with intra-arterial microsphere injection in mice.
- Utilized two-photon microscopy for in vivo imaging of microvasculature and occlusions.
- Validated the injection technique using post-mortem 3D imaging and demonstrated utility with in vivo imaging.
Main Results:
- Established a consistent and robust method for inducing cerebral microvascular embolisms.
- Enabled long-term in vivo imaging of micro-occlusions.
- Demonstrated the microsphere distribution and imaging capabilities.
Conclusions:
- The developed method offers a powerful tool for studying brain microvascular occlusions.
- Facilitates investigation into the impact and clearance of micro-embolisms.
- Advances research in cerebrovascular disease and stroke models.

