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A High Throughput, Multiplexed and Targeted Proteomic CSF Assay to Quantify Neurodegenerative Biomarkers and Apolipoprotein E Isoforms Status
Published on: October 20, 2016
Shared metabolomic signatures for prognostic precision across brain injuries
Santtu Hellström1,2, Antti Sajanti1,2, Aditya Jhaveri3
1Neurocenter, Department of Neurosurgery, Turku University Hospital and University of Turku, P.O. Box 52, FI-20521, Turku, Finland.
Introduction:
Metabolomic alterations have been linked to a range of neurological conditions. Investigating temporal changes in serum metabolomic profiles, regardless of the type of brain injury may reveal prognostic indicators.
Research Question:
We hypothesize that specific metabolomic signatures, conserved across different acute brain injuries, can serve as robust predictors of patient outcomes.
Material And Methods:
In this longitudinal prospective observational study, serum samples were collected early (2 ± 1 day) and late (6 ± 2 days) post-injury from a total of 73 patients with ischemic stroke (n = 30), aneurysmal subarachnoid hemorrhage (n = 30), and traumatic brain injury (n = 13). Outcomes were categorized as favorable (modified Rankin Scores (mRS) 0-3) and unfavorable (mRS 4-6) three months post-injury. Metabolomic profiling (Orbitrap mass spectrometry) of 462 metabolites, analyzed using statistical and machine learning methods, identified significant outcome differences (p < 0.05, FDR-corrected).
Results:
Early-stage samples indicated good prognostic power with a combination of uridine, tryptophan, and lactic acid (AUC 88.8 %, OR 5.29, p < 0.0001). Late-stage samples showed high discriminatory accuracy with a combination of prostaglandin J2, gamma-linolenic acid, N-acetyl-L-alanine, uridine, N-alpha-acetyl-L-asparagine, 3-hydroxy-3-methylglutarate, propionate, and creatinine (AUC 94.4 %, OR 14.5, p < 0.0001). Pathway analyses revealed significant associations with glycolysis/gluconeogenesis, pyrimidine metabolism, and tryptophan metabolism at early stages, and fatty acid biosynthesis, pyruvate metabolism, phenylalanine metabolism, and tryptophan metabolism at later stages.
Discussion And Conclusion:
These findings underscore the dynamic nature of metabolomic profiles in acute brain injuries and highlight common metabolites as significant prognostic markers across brain injury types.

