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Chronic liver disease classification using deep learning with SHAP-optimized hybrid features.

Naif Almusallam1, Salman Khan2

  • 1Department of Management Information Systems, School of Business, King Faisal University, Al Ahsa, Saudi Arabia.

Iscience
|December 9, 2025
PubMed
Summary
This summary is machine-generated.

This study introduces a novel deep neural network (DNN) for accurate liver disease detection, achieving 92.50% accuracy. The framework enhances early diagnosis and patient outcomes using machine learning.

Keywords:
health sciencesmachine learning

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Area of Science:

  • Hepatology
  • Medical Informatics
  • Artificial Intelligence in Medicine

Background:

  • Liver disorders present significant health risks, necessitating timely and accurate diagnosis for effective treatment.
  • Machine learning (ML), especially deep learning, shows promise in developing advanced diagnostic tools for disease prediction.
  • Current diagnostic methods can be improved with more accurate and efficient predictive capabilities.

Purpose of the Study:

  • To develop and evaluate a novel predictive framework for accurate liver disease detection using deep neural networks (DNNs).
  • To integrate feature ranking and projection-based algorithms within the DNN framework to enhance predictive performance.
  • To improve model interpretability by applying SHapley Additive exPlanations (SHAP) to identify key predictive features.

Main Methods:

  • A deep neural network (DNN) model was developed for liver disease prediction.
  • Feature ranking and projection-based algorithms were integrated into the DNN framework.
  • SHapley Additive exPlanations (SHAP) were employed for model interpretability and feature importance analysis.
  • The model's performance was validated using 10-fold cross-validation.

Main Results:

  • The proposed DNN model achieved an average accuracy (ACC) of 92.50% under 10-fold cross-validation.
  • The DNN model demonstrated superior performance compared to traditional ML algorithms and existing state-of-the-art methods.
  • SHAP analysis successfully identified influential features impacting liver disease prediction.

Conclusions:

  • The novel DNN framework offers a highly accurate and interpretable approach for liver disease detection.
  • The findings suggest significant potential for improving diagnostic accuracy and supporting early intervention strategies.
  • This ML-based approach can enhance patient outcomes through more effective liver disorder management.