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Subset selection based fusion for biomedical information retrieval tasks.

Jiahui Sun1, Shengli Wu2, Xiangjun Shen1

  • 1School of Computer Science, Jiangsu University, Zhenjiang, China.

BMC Bioinformatics
|December 9, 2025
PubMed
Summary
This summary is machine-generated.

New methods for selecting retrieval systems enhance biomedical information retrieval. These ranking-based approaches, including Sequential Forward Search (SFS) and Diversity & Performance (D&P), significantly boost data fusion effectiveness and efficiency.

Keywords:
Biomedical information retrievalData fusionInformation retrievalRanking-based methodSubset selection

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Area of Science:

  • Biomedical Informatics
  • Information Retrieval
  • Computer Science

Background:

  • Biomedical information retrieval systems face challenges in effectiveness and efficiency.
  • Data fusion techniques can improve retrieval performance but require optimal system selection.
  • Existing methods for selecting retrieval systems for fusion may not be optimal.

Purpose of the Study:

  • To propose and evaluate novel ranking-based methods for selecting optimal subsets of retrieval systems for data fusion.
  • To enhance the effectiveness and efficiency of biomedical information retrieval.

Main Methods:

  • Proposed three ranking-based subset selection methods: Sequential Forward Search (SFS), Diversity & Performance (D&P), and Performance & Diversity (P&D).
  • Applied these methods in conjunction with Reciprocal Rank Fusion (RRF).
  • Conducted experiments on four TREC medical datasets using 62-125 candidate retrieval systems, selecting up to 15 for fusion.

Main Results:

  • The proposed subset selection methods significantly improved retrieval performance.
  • Fusion of selected systems using RRF resulted in performance improvements of 10% to over 60% compared to the best individual system.
  • The methods outperformed state-of-the-art technology by a considerable margin.

Conclusions:

  • The proposed subset selection approach provides a practical and cost-efficient solution for biomedical information retrieval.
  • Achieved substantial performance gains while reducing computational overhead.
  • Offers a significant advancement over existing methods for optimizing retrieval system fusion.