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Updated: Jan 9, 2026

A Novel Bioreactor for High Density Cultivation of Diverse Microbial Communities
Published on: December 25, 2015
Characterization of Structural and Functional Changes in Bacterial Communities During Enzyme Fermentation.
Zhugui Wen1, Xinyu Liu2, Simiao Ma2
1School of Wetlands, Yancheng Teachers University, Yancheng, 224007, China. wenzhugui@163.com.
Agricultural enzymes impact soil microbial communities differently in liquid versus compost fermentation. While enzymes reduced species in liquid fermentation, compost showed increased diversity and uniform phyla abundance, offering insights for agricultural applications.
Area of Science:
- Agricultural Science
- Microbiology
- Environmental Science
Background:
- Soil health is crucial for agriculture, and microbial communities play a vital role.
- Enzyme applications are emerging as a strategy to manage soil problems.
- Characterizing microbial communities during fermentation is complex due to environmental influences.
Purpose of the Study:
- To analyze bacterial community structure and functional traits during compost fermentation with and without enzyme addition.
- To compare the effects of exogenous enzymes on microbial communities in liquid fermentation versus compost.
Main Methods:
- 16S rRNA high-throughput sequencing was used to analyze bacterial community structure.
- Kyoto Encyclopedia of Genes and Genomes (KEGG) database was utilized to identify microbial functional traits.
- Compost and liquid fermentation samples were analyzed at middle and late stages.
Main Results:
- Exogenous enzymes reduced microbial species in liquid fermentation, leading to a dominance of Proteobacteria (70%).
- In compost, bacterial abundance increased with fermentation time, showing uniform phyla distribution.
- Key metabolic pathways identified were related to carbohydrate, amino acid, and cofactor metabolism.
Conclusions:
- Exogenous enzyme supplementation significantly alters microbial community succession and metabolic functions in both liquid and compost fermentation.
- Enzyme application provides a theoretical basis for improving traditional compost and agricultural practices.
- Understanding microbial responses to enzymes is key for sustainable agriculture.
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