A Distinct Intestinal Domination Fingerprint in Patients Undergoing Allo-HSCT: Dynamics, Predictors and Implications
Alexandre Soares Ferreira Junior1, Danielle Amanda Niz Alvarez1, Larissa da Silva Souza1
1Laboratory of Immunomodulation and Microbiota, Department of Genetics, Microbiology and Immunology, Institute of Biosciences, Sao Paulo State University, Botucatu 18618-970, SP, Brazil.
Journal of Clinical Medicine
|December 11, 2025
Summary
Intestinal domination by genera like Bacteroides is common in Brazilian patients undergoing allogeneic hematopoietic stem cell transplantation (allo-HSCT). This domination did not impact survival or Graft-versus-Host-Disease, suggesting unique microbiota patterns in this population.
Area of Science:
- Microbiome research
- Hematopoietic stem cell transplantation
- Gastrointestinal health
Background:
- Enterococcus domination is well-studied in allogeneic hematopoietic stem cell transplantation (allo-HSCT).
- The prevalence and clinical significance of other dominant intestinal genera in allo-HSCT patients are less understood.
- Geographic variations in microbiota composition may influence outcomes.
Purpose of the Study:
- To investigate the dynamics, predictors, and clinical implications of intestinal domination in Brazilian patients undergoing allo-HSCT.
- To identify dominant bacterial genera beyond Enterococcus in this patient cohort.
- To assess the association between intestinal domination and overall survival or acute Graft-versus-Host-Disease (aGvHD).
Main Methods:
- Prospective study across four Brazilian centers.
- Longitudinal collection of fecal specimens from pre-allo-HSCT to six months post-transplantation.
- 16S rRNA gene sequencing for intestinal domination identification; logistic regression for predictor analysis.
Main Results:
- 68% of 192 fecal specimens showed intestinal domination.
- Dominant genera included Bacteroides, Akkermansia, Phascolarctobacterium, and Escherichia-Shigella.
- No significant association found between domination by these genera and overall survival or aGvHD incidence.
Conclusions:
- Brazilian allo-HSCT patients exhibit a distinct intestinal domination profile.
- No patient characteristics reliably predicted intestinal domination.
- Geographic context is crucial for interpreting microbiota-outcome associations in allo-HSCT.
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