Related Experiment Video
Updated: Jan 8, 2026

Experimental Column Setup for Studying Anaerobic Biogeochemical Interactions Between Iron OxyHydroxides, Trace Elements, and Bacteria
Published on: December 19, 2017
Facet- and pH-Dependent Binding Mechanisms of Natural Organic Matter on Hematite
Yatong Zhao1,2, Mark Bowden1, Zheming Wang1
1Pacific Northwest National Laboratory, Richland, Washington 99354, United States.
Abstract:
Natural organic matter (NOM) plays a crucial role in biogeochemical processes, influencing contaminant transport, carbon cycling, and metal speciation in the environment. However, the molecular-level interaction mechanisms between NOM and mineral surfaces remain poorly understood due to the structural complexity of NOM and the facet-dependent reactivity of minerals. In this study, we investigate the binding mechanisms of NOM on hematite (α-Fe2O3) surfaces using dynamic force spectroscopy (DFS) and classical density functional theory (cDFT) simulations. The adsorption behavior of four key NOM functional groups, carboxyl, phosphonate, hydroxyl, and amine, was examined for three hematite facets: (001), (012), and (113). Our results reveal a range of binding strengths, with ligand exchange and electrostatic interactions playing dominant roles in adsorption. The (001) facet exhibited the strongest interactions with amine and hydroxyl, while the (113) facet favored carboxyl and phosphonate binding. The effect of pH on binding forces varied by functional groups, highlighting the interplay of electrostatic interactions, hydration forces, and surface coordination chemistry. These findings provide detailed insights into NOM-mineral interactions that could be used to parametrize surface complexation models used in reactive transport simulations for a better understanding of the mobility and bioavailability of contaminants in natural environments.
Related Concept Videos
Oxygen Transport in the Blood
Globular and Fibrous Proteins
Globular proteins are also known as spheroproteins and typically are approximately round in shape. They contain a mix of amino acid types and contain differing sequences in their primary structures. Globular proteins have many different functions, such as enzymes, cellular messengers, and molecular transporters. These roles often require the proteins to be...
Hemoglobin
When all four heme groups are bound to oxygen, the resulting molecule is called oxyhemoglobin. As a result, arterial blood...
Metal-Ligand Bonds
In these complexes, transition metals form coordinate covalent bonds, a kind of Lewis acid-base interaction in which both of the electrons in the bond are contributed by a donor (Lewis base) to an electron acceptor (Lewis acid). The Lewis acid in...
Complexometric Titration: Ligands
Valence Bond Theory

