Revisiting fluorine relaxation: a perspective on fluorine NMR in structural and dynamic studies of biomolecules
Yuki Toyama1, Koh Takeuchi2, Ichio Shimada3
1RIKEN Center for Integrative Medical Sciences (IMS), 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan; Graduate School of Pharmaceutical Sciences, The University of Tokyo, Hongo, 7-3-1 Bunkyo-ku, Tokyo 113-0033, Japan.
Abstract:
NMR is widely employed to investigate the structure and dynamics of biomolecules such as proteins and nucleic acids, owing to its unique ability to resolve signals from individual residue sites and thereby provide site-specific information. Among NMR spin probes, fluorine-19 (19F) has been extensively applied across diverse systems because of its favorable properties, including spin 1/2, 100 % natural abundance, low background signals, and high sensitivity to small variations in chemical environments. While advances in labeling strategies have expanded the applications of 19F, relatively less attention has been paid to its intrinsic relaxation properties; namely, how the longitudinal and transverse relaxation rates of 19F are defined and what types of magnetic interactions govern these relaxation processes. A major difficulty lies in the fact that 19F relaxation is affected by both intra- and inter-residual 1H-19F dipole-dipole interactions as well as by its intrinsically large chemical shift anisotropy, complicating the quantitative interpretation of relaxation behavior. In this perspective, we revisit the theoretical background of 19F relaxation measurements, with particular focus on 1H-19F interactions, aiming to provide guidelines for interpreting 19F NMR relaxation data and for developing novel experimental strategies.
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