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Enhancing interpretability for Bayesian basket trial designs by effective sample size.

Xin Chen1, Jingyi Zhang1, Wenyun Yang1

  • 1Department of Biostatistics, China Pharmaceutical University, Nanjing, China.

BMC Medical Research Methodology
|December 16, 2025
PubMed
Summary
This summary is machine-generated.

Effective sample size (ESS) quantifies information borrowing in Bayesian basket trials, aiding design and interpretation. This statistical tool helps researchers understand how data is shared across tumor types for better trial outcomes.

Keywords:
Basket trialBayesian clinical trial designBayesian hierarchical modelEffective sample sizeInformation borrowing

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Area of Science:

  • Biostatistics
  • Clinical Trial Design
  • Bayesian Inference

Background:

  • Growing interest in Bayesian methods for information sharing across tumor types in basket trials.
  • Existing Bayesian hierarchical models (BHM) lack a clear measure for quantifying information borrowing.
  • Difficulty for non-statisticians to understand complex Bayesian designs due to lack of interpretability.

Purpose of the Study:

  • To introduce and validate the effective sample size (ESS) as a tool to quantify information borrowing in Bayesian basket trials.
  • To demonstrate the utility of ESS in both the design and analysis phases of clinical trials.
  • To provide a more interpretable metric for complex Bayesian statistical models.

Main Methods:

  • Leveraging the effective sample size (ESS) concept for Bayesian basket trials.
  • Proposing ESS-based strategies for information borrowing.
  • Utilizing mean squared error (MSE) to derive ESS, balancing bias and variance.
  • Reanalyzing the RAGNAR study and conducting simulation studies to demonstrate ESS interpretability.

Main Results:

  • ESS effectively quantifies the impact of information borrowing on mean squared error (MSE).
  • ESS intuitively characterizes the degree of information borrowing across tumor types.
  • ESS demonstrates alignment with type I error rates and statistical power, serving as a valuable analytical complement.

Conclusions:

  • Quantifying information borrowing with ESS aids trialists in designing Bayesian basket trials.
  • ESS facilitates reasonable evaluation and interpretation of Bayesian analysis results.
  • ESS supports sensitivity analyses and helps determine the appropriate amount of information borrowing in trials.