Machine learning in nanoscience and beyond: Workflows, data processing, XAI and ITAP metrics, language-based models

Recent advances in nano-sciences including colloids, interfaces as well as material science in general, are increasingly driven by artificial intelligence (AI), which combines theory, computation, experiment, data acquisition and analysis, and implementation. Previously, we covered applications of machine learning (ML) in nanoarchitectonics, where phenomena at nanoscale were compared with those at larger scale and where fundamental models were analyzed in application to colloids-, interface-, and material science area in general. Scrutinizing historical discovery paradigms from empirical observation to theoretical modeling, here in Part-II (as continuation of Adv. Colloids Interface Sci. 2025, 343, 103546), we extend that parallel to modern analysis workflows, data processing, evaluation metrics, application of language-based models. This review is organized around three pillars: (a) data acquisition, integration, and preprocessing for model-ready datasets; (b) model development encompassing classical (shallow) and advanced (deep) learning architectures; and (c) AI-assisted fabrication, characterization, and analysis of materials especially for colloidal and interfacial science. We compare major ML models - supervised, unsupervised, semi-supervised, and reinforcement learning - alongside advanced techniques such as transfer learning and autoencoders, highlighting applications across the materials innovation pipeline, from design and synthesis optimization to property prediction and performance evaluation. The concept of explainable Artificial Intelligence (XAI) is examined using the ITAP framework (interpretability, time efficiency, accuracy, and parameter sensitivity) to improve model transparency, reliability, and interpretability. Finally, we discuss the emergence of autonomous laboratories and outline key challenges, future directions toward transparent, reproducible, and sustainable AI-driven nanoarchitectonics, where adaptation and application of language-based models is expected to play an important role.