DNMT2-m5C-ACLY Axis Promotes Lenvatinib Resistance in Hepatocellular Carcinoma Through Histone Acetylation-Mediated
Shiguang Yang1,2, Jie Li3, Shengwei Mao1
1Department of Hepatobiliary Surgery and Liver Transplantation, Key Laboratory of Carcinogenesis and Cancer Invasion, Liver Cancer Institute, Zhongshan Hospital, Fudan University, Shanghai, China.
Abstract:
Lenvatinib serves as a first-line therapy for advanced hepatocellular carcinoma (HCC), but its clinical efficacy is severely limited by acquired drug resistance. Consequently, the identification of therapeutic targets to reverse lenvatinib resistance may offer novel strategies to achieve enhanced and durable treatment responses. In this study, a global elevation in the levels of m5C modification is observed in lenvatinib-resistant cells compared with their parental counterparts. DNA methyltransferase 2(DNMT2), functioning as an RNA methyltransferase, is markedly upregulated in lenvatinib-resistant specimens and correlated with poor patient survival outcomes. Both in vitro and in vivo experiments indicated that DNMT2 downregulation effectively overcame lenvatinib resistance by reducing HCC cell proliferation and promoting apoptosis, thereby restoring drug sensitivity. Mechanistically, DNMT2 functioned together with Y-box binding protein 1 (YBX1) to stabilize downstream adenosine triphosphate citrate lyase (ACLY) mRNA through m5C modification. This process activated the Notch signaling pathway by increasing intracellular acetyl-CoA levels and promoting histone acetylation, driving the progression of lenvatinib resistance. Critically, pharmacological inhibition of ACLY combined with lenvatinib treatment enhanced the therapeutic efficacy against HCC and could reduce the tumor burden in multiple preclinical models. Collectively, the findings indicate the importance of the DNMT2-ACLY-NOTCH signaling axis in lenvatinib resistance and propose novel combinatorial therapies to improve HCC treatment outcomes.
Insights
Drug resistance to lenvatinib in liver cancer (HCC) can be overcome by targeting DNA methyltransferase 2 (DNMT2). Downregulating DNMT2 restores sensitivity by inhibiting the DNMT2-ACLY-NOTCH pathway, offering new therapeutic strategies.
Area of Science:
- Oncology
- Molecular Biology
- Biochemistry
Background:
- Lenvatinib is a first-line treatment for advanced hepatocellular carcinoma (HCC).
- Acquired drug resistance limits lenvatinib's clinical efficacy.
- Identifying targets to reverse lenvatinib resistance is crucial for improved treatment outcomes.
Purpose of the Study:
- To investigate the mechanisms underlying lenvatinib resistance in HCC.
- To identify novel therapeutic targets for overcoming lenvatinib resistance.
- To evaluate the potential of targeting the DNMT2-ACLY-NOTCH axis for HCC treatment.
Main Methods:
- Global m5C modification levels were analyzed in lenvatinib-resistant HCC cells.
- DNA methyltransferase 2 (DNMT2) expression was assessed in resistant specimens.
- In vitro and in vivo experiments were conducted to evaluate the effect of DNMT2 downregulation.
- The interaction between DNMT2, Y-box binding protein 1 (YBX1), and adenosine triphosphate citrate lyase (ACLY) mRNA was investigated.
- Notch signaling pathway activation and its relation to intracellular acetyl-CoA and histone acetylation were studied.
- Pharmacological inhibition of ACLY in combination with lenvatinib was evaluated in preclinical models.
Main Results:
- Lenvatinib-resistant HCC cells exhibited elevated m5C modification levels.
- DNMT2 was upregulated in resistant specimens and correlated with poor survival.
- DNMT2 downregulation restored sensitivity to lenvatinib by reducing proliferation and promoting apoptosis.
- DNMT2 stabilized ACLY mRNA via m5C modification, activating the Notch pathway.
- Combined inhibition of ACLY and lenvatinib treatment reduced tumor burden in preclinical models.
Conclusions:
- The DNMT2-ACLY-NOTCH signaling axis plays a critical role in lenvatinib resistance in HCC.
- DNMT2 downregulation is a promising strategy to overcome lenvatinib resistance.
- Combinatorial therapy targeting ACLY and lenvatinib offers a potential new approach for HCC treatment.
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