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  2. Midas: Rapid, Multiplexed Molecular Profiling For Integrated Host-pathogen Analysis.
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  2. Midas: Rapid, Multiplexed Molecular Profiling For Integrated Host-pathogen Analysis.

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MIDAS: rapid, multiplexed molecular profiling for integrated host-pathogen analysis.

Yong Jun Lim1, Mohammad Asadi Tokmedash2, Matthew Allen3

  • 1Department of Chemical and Biological Engineering, Korea University, Seoul, Republic of Korea.

Nature Communications
|December 19, 2025

View abstract on PubMed

Summary
This summary is machine-generated.

A new platform, MIDAS, rapidly quantifies bacterial RNA and host inflammatory proteins simultaneously. This integrated molecular analysis offers a faster alternative to traditional methods for infectious disease research.

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Area of Science:

  • Biotechnology
  • Infectious Disease Diagnostics
  • Bioanalytical Chemistry

Background:

  • Integrated molecular analysis is crucial for complex infectious diseases, but current tools often analyze pathogens or host responses separately.
  • Sepsis research specifically needs rapid methods to quantify both microbial and host biomarkers for effective diagnosis and treatment.
  • Existing diagnostic workflows, such as microbial culture, are time-consuming, delaying critical clinical decisions.

Purpose of the Study:

  • To develop and present MIDAS (Multiplexed Intelligent Diffraction Analysis System), a novel platform for simultaneous host-pathogen molecular profiling.
  • To demonstrate the potential of MIDAS for rapid, integrated analysis in infectious conditions, particularly sepsis.
  • To evaluate the feasibility of MIDAS for potential point-of-care applications.

Main Methods:

  • Integration of shape-encoded hydrogel particles with lens-free diffraction imaging.
  • Application of deep learning algorithms for data analysis.
  • Simultaneous quantification of bacterial RNA and inflammatory proteins within a single assay system.

Main Results:

  • The MIDAS assay achieved multiplexed measurements in under 4 hours, significantly faster than traditional culture methods (20-40 hours).
  • High concordance was observed between MIDAS results and established methods (culture, qPCR, ELISA) in a porcine sepsis model.
  • The platform demonstrated successful simultaneous quantification of both bacterial RNA and host inflammatory proteins.

Conclusions:

  • MIDAS represents a proof-of-concept for a flexible, integrated host-pathogen profiling platform.
  • The system's speed and multiplexing capabilities offer a significant advancement over current diagnostic workflows.
  • Further clinical validation is needed, but MIDAS shows promise for accessible diagnostic tools in healthcare, agriculture, and food safety.