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An algorithm for generating biophysically realistic three-dimensional arteriolar networks applied to rat skeletal
Yuki Bao1, Jefferson C Frisbee1,2, Daniel Goldman1
1Department of Medical Biophysics, University of Western Ontario, London, Ontario, Canada.
Physiological Reports
|December 20, 2025
Summary
This study developed a computational algorithm to simulate microvascular networks in rodent skeletal muscles. The model shows tissue shape impacts microvessel properties only for larger vessels, aiding perfusion research.
Area of Science:
- Physiology
- Biomedical Engineering
- Computational Biology
Background:
- The microcirculation's role in tissue perfusion is crucial.
- The relationship between tissue geometry and microvascular networks remains unclear.
- Understanding this relationship is vital for studying perfusion in various tissues.
Purpose of the Study:
- To develop and validate a computational algorithm for simulating arteriolar networks in ellipsoidal tissue volumes.
- To investigate the influence of tissue shape and size on microvascular properties.
- To provide a tool for research on perfusion distribution in skeletal muscles.
Main Methods:
- Developed a constrained constructive optimization algorithm for iterative network generation.
- Incorporated user-adjustable parameters for tissue dimensions and microvessel density.
- Analyzed geometric and hemodynamic properties of simulated networks.
Main Results:
- Simulated networks showed statistical similarity across different skeletal muscle tissues.
- Tissue shape influenced microvascular properties only above a ~25 μm vessel diameter threshold.
- Algorithm validation against in vivo data confirmed accuracy and adaptability.
Conclusions:
- The developed algorithm accurately simulates microvascular networks in varying tissue shapes and sizes.
- Tissue shape has a limited impact on microvessel properties, primarily affecting larger vessels.
- This tool advances the understanding of perfusion distribution in healthy tissues.

