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Microbiota Modulation by Antibiotics

Antibiotics have revolutionized modern medicine by saving countless lives from bacterial infections. However, their widespread use has inadvertently harmed the delicate balance of the human gut microbiota. The gut microbiota, a complex community of bacteria, archaea, viruses, and fungi, plays a vital role in regulating metabolism, immune responses, and maintaining intestinal health. Antibiotics, especially broad-spectrum types, disrupt this ecosystem by eradicating both harmful and beneficial...

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Single-cell transcriptomics reveals an abnormal immune microenvironment in plasma cell mastitis.

Qingtao Ni1, Gaohua Han1, Chi Pan2

  • 1Department of Oncology, The Affiliated Taizhou People's Hospital of Nanjing Medical University, Taizhou School of Clinical Medicine, Nanjing Medical University, Taizhou, China.

Annals of Medicine
|December 20, 2025
PubMed
Summary

This study provides a detailed cellular and molecular analysis of plasma cell mastitis (PCM), revealing key immune cell alterations and gene expression changes. The findings offer a foundational resource for understanding PCM pathogenesis and developing new treatments.

Keywords:
Single-cell transcriptomicsimmune microenvironmentplasma cell mastitissignalling pathway

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Area of Science:

  • Immunology
  • Genomics
  • Cell Biology

Background:

  • Plasma cell mastitis (PCM) is a non-bacterial inflammatory breast disorder affecting women of reproductive age.
  • A comprehensive analysis of the cellular and molecular landscape of PCM is lacking.

Purpose of the Study:

  • To conduct a systematic, high-resolution analysis of the cellular and molecular characteristics of plasma cell mastitis.
  • To identify key cell types, gene expression patterns, and cellular interactions in PCM tissue.

Main Methods:

  • Utilized Comprehensive Cellular Indexing of Transcriptomes and Epitopes by Sequencing (CITE-seq) on 10,185 cells from PCM tissue.
  • Performed differential gene expression analysis, functional enrichment, and cellular communication analysis.

Main Results:

  • Generated a detailed transcriptomic atlas of PCM, identifying thirteen distinct cell clusters and annotating eight cell types, including endothelial cells, common myeloid progenitor cells, and neutrophils.
  • Revealed significant alterations in immune cell composition and differential gene expression between normal and PCM samples.
  • Analyzed cellular communication networks to understand cell-to-cell interactions within the PCM microenvironment.

Conclusions:

  • This study presents a systematic and valuable perspective on the cellular and molecular mechanisms underlying plasma cell mastitis.
  • The generated data serves as a fundamental resource for future research into PCM pathogenesis, associated diseases, and potential therapeutic interventions.