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Scalable and Adaptive Spatiotemporal Modeling for Task-Based fMRI Analysis.

Jungin Choi1, Abhirup Datta1, Martin Lindquist1

  • 1Department of Biostatistics, Johns Hopkins University.

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|December 22, 2025
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Summary
This summary is machine-generated.

We developed SPLASH, a new framework for analyzing brain activity in fMRI data. SPLASH improves spatial accuracy and computational efficiency, offering better insights into brain function.

Keywords:
Adaptive spatial modelingFunctional MRIHemodynamic response modelingHierarchical false discovery rateSpatiotemporal spline regression

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Area of Science:

  • Neuroimaging
  • Functional Magnetic Resonance Imaging (fMRI)
  • Statistical Modeling

Background:

  • Voxel-wise general linear models (GLMs) are standard for task-based fMRI but produce fragmented activation maps.
  • Existing spatial methods like kernel smoothing blur boundaries, while Bayesian models are computationally intensive.

Purpose of the Study:

  • Introduce SPLASH (Spline-Based Processing for Localized Adaptive Spatial Hemodynamics), a novel framework for scalable and spatially adaptive fMRI analysis.
  • Address limitations of current methods by improving spatial resolution and computational efficiency.

Main Methods:

  • Utilized localized thin-plate spline regression within brain parcels for spatial adaptation.
  • Implemented a hierarchical structure with a two-stage selective inference procedure for false discovery rate control.
  • Validated through simulations and application to Human Connectome Project data.

Main Results:

  • SPLASH demonstrated superior performance in simulations, with Mean Squared Error (MSE) 20-40% lower than prior spatial models.
  • Maintained controlled False Positive Rate (FPR) and False Negative Rate (FNR) across simulations.
  • Required only 2% of the computation time of Bayesian spatial approaches and showed higher reproducibility on real data.

Conclusions:

  • SPLASH offers a generalizable, spatially adaptive, and scalable framework for large-scale fMRI studies.
  • Enhances statistical inference and neuroscientific interpretability by producing sharper activation patterns.
  • Provides a computationally efficient alternative to existing spatial analysis methods.