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Updated: Jan 8, 2026

Analysis of the c-KIT Ligand Promoter Using Chromatin Immunoprecipitation
Published on: June 27, 2017
The critical role of the proto-oncogene c-Kit in TSC renal cystogenesis
Kamyar Zahedi1,2, Sharon Barone1,2, Marybeth Brooks1,2
1Research Services, New Mexico Veterans Health Care System, Albuquerque, NM, USA.
Abstract:
The epithelium of kidney cysts in mouse Tuberous Sclerosis complex (TSC) models and TSC patients is composed of proliferating A-intercalated cells. The ablation of the Foxi1 gene abolished renal cystogenesis in principal cell-specific Tsc1 knockout (Tsc1-KO) mice. RNAseq studies comparing kidneys of Tsc1-KO vs. wild-type (WT) and Tsc1/Foxi1-double-knockout identified c-Kit, a tyrosine kinase receptor (RTK), as a transcript whose expression significantly increased in Tsc1-KO mice. Overexpression of FOXI1 in kidney M-1 cells significantly increased c-Kit expression levels. Kidney cystogenesis was abolished in Tsc1-KO mice by inactivating the c-Kit gene via the generation of Tsc1/c-Kit-double-knockout mice. The treatment of Tsc1-KO mice with Imatinib, a specific inhibitor of c-KIT, significantly diminished kidney cystogenesis. Renal cystogenesis was associated with ERK1/2, AKT, and RSK1-mediated phospho-inactivation of TSC2. In contrast, activation of ERK1/2, AKT, and RSK1, as well as phosphorylation of TSC2, was notably reduced in the kidneys of Tsc1/c-Kit-dKO mice. We propose that c-KIT is a crucial mediator of TSC renal cystogenesis and that its inhibition may constitute a novel approach for the treatment of kidney cysts in TSC.
Insights
Targeting c-Kit, a receptor tyrosine kinase, can halt kidney cyst growth in Tuberous Sclerosis Complex (TSC). Inhibiting c-Kit shows promise for treating TSC-related kidney cysts.
Area of Science:
- Nephrology
- Molecular Biology
- Genetics
Background:
- Tuberous Sclerosis Complex (TSC) is characterized by kidney cyst formation.
- The epithelium of kidney cysts in TSC models and patients consists of proliferating A-intercalated cells.
- FOXI1 gene ablation prevents renal cystogenesis in specific Tsc1 knockout mice.
Purpose of the Study:
- To investigate the role of c-Kit in Tuberous Sclerosis Complex (TSC) related renal cystogenesis.
- To explore c-Kit as a potential therapeutic target for kidney cysts in TSC.
Main Methods:
- RNA sequencing to identify differentially expressed genes in Tsc1-KO mice.
- Generation of Tsc1/c-Kit double knockout mice to assess c-Kit's role.
- Treatment of Tsc1-KO mice with Imatinib, a c-KIT inhibitor.
Main Results:
- c-Kit expression was significantly increased in Tsc1-KO mouse kidneys.
- Ablation of c-Kit abolished kidney cystogenesis in Tsc1-KO mice.
- Imatinib treatment significantly reduced kidney cystogenesis in Tsc1-KO mice, impacting ERK1/2, AKT, and RSK1 signaling pathways.
Conclusions:
- c-Kit is a critical mediator of renal cystogenesis in Tuberous Sclerosis Complex.
- Inhibition of c-Kit presents a novel therapeutic strategy for treating kidney cysts in TSC patients.
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