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Published on: June 14, 2020
Basic Science and Pathogenesis
Jerry Jierui Lou1, Peter Chang1, Kiana D Nava2
1University of California, Irvine, School of Medicine, Irvine, CA, USA.
This study introduces a machine learning (ML) algorithm for automated brain arteriolosclerosis assessment, improving accuracy and efficiency over manual methods. The ArtS and SITE tools offer a promising approach to enhance the analysis of vascular pathology in whole slide images.
Area of Science:
- Neuropathology
- Computational Pathology
- Medical Imaging Analysis
Background:
- Current brain arteriolosclerosis assessment relies on subjective, semi-quantitative scales from manual histological examination.
- Manual methods exhibit limited inter-rater reliability and lack precise quantitative metrics.
- Region-specific, high-resolution analysis is often impractical manually.
Purpose of the Study:
- To develop and validate a machine learning (ML)-based algorithm for automated morphometric analysis of arteriolosclerotic blood vessels.
- To introduce Arteriolosclerosis Segmentation (ArtS) and Sclerotic Index and Thickness Extractor (SITE) for quantitative assessment on whole slide images (WSIs).
Main Methods:
- Digitized hematoxylin and eosin-stained brain WSIs from three brain banks.
- Trained three ML models within ArtS for blood vessel detection, arteriolosclerosis classification, and vessel wall/lumen segmentation.
- Utilized the SITE tool to extract sclerotic indices and wall thicknesses from segmented vessels.
Main Results:
- ArtS demonstrated robust performance in blood vessel detection (AUC-ROC up to 0.79) and arteriolosclerosis classification (accuracy up to 0.94).
- Arteriolosclerotic vessel segmentation achieved Dice scores up to 0.73 and AUC-ROC up to 0.92.
- SITE successfully calculated quantitative metrics comparable to expert evaluations.
Conclusions:
- The ArtS and SITE algorithm shows significant potential for quantitative morphometric analysis of arteriolosclerosis.
- These ML tools can enhance current human-based assessment methods for vascular pathology.
- Further optimization could lead to a valuable assistive tool for neuropathologists.
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