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Published on: February 24, 2023
Multi-pathogen respiratory surveillance in western China: Synchronized circulation patterns and predictive modeling
Yusong Liu1, Yong Jing2, Jiaqiang Wang1
1Department of Laboratory Medicine and Sichuan Provincial Key Laboratory for Human Disease Gene Study, Sichuan Provincial People's Hospital, University of Electronic Science and Technology of China, Chengdu, Sichuan 610072, China.
Abstract:
Respiratory pathogen dynamics in western China following COVID-19 restrictions remain poorly characterized. We analyzed 50,247 specimens across 14 pathogens from January 2020-December 2024 using multiplex PCR at Sichuan Provincial People's Hospital. Pathogen positivity is increased by 314% post-pandemic, with H1N1 showing 1,826% and Mycoplasma pneumoniae showing 519% increases. Human rhinovirus exhibited highest overall detection at 9.05%. Correlation analysis revealed 89% of pathogen pairs showed positive temporal associations, contrasting with typical competitive endemic patterns. School-aged children experienced disproportionate burden, with M. pneumoniae reaching 30.0% positivity versus 9.1% in younger children. Seasonal autoregressive integrated moving average (SARIMA) forecasting models achieved 15.2%-24.8% mean absolute percentage errors, enabling 12-month predictions. Winter months concentrated six pathogen peaks. These findings demonstrate synchronized multi-pathogen resurgence following prolonged control measures, supporting integrated surveillance approaches monitoring pathogen interactions alongside individual dynamics for enhanced epidemic preparedness.
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