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Texture-Based Preprocessing Framework with nnU-Net Model for Accurate Intracranial Artery Segmentation.

Kyuseok Kim1, Ji-Youn Kim2

  • 1Institute of Human Convergence Health Science, Gachon University, 191, Hambakmoero, Yeonsu-gu, Incheon 21936, Republic of Korea.

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|December 24, 2025
PubMed
Summary
This summary is machine-generated.

A novel texture-based preprocessing method significantly enhances intracranial artery segmentation from digital subtraction angiography (DSA) using the nnU-Net model. This approach improves accuracy and topological details for better neurovascular diagnosis.

Keywords:
cerebrovascular extractiondeep learningdigital subtraction angiographypreprocessingtexture analysistime sequence

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Area of Science:

  • Medical Imaging
  • Artificial Intelligence
  • Neuroscience

Background:

  • Accurate segmentation of intracranial arteries from DSA is crucial for diagnosing neurovascular conditions and planning treatments.
  • Current deep learning models show promise but are limited by preprocessing techniques.
  • Enhancing preprocessing is key to improving the accuracy of vascular extraction.

Purpose of the Study:

  • To develop and evaluate a texture-based contrast enhancement preprocessing framework integrated with nnU-Net for improved intracranial artery segmentation.
  • To assess the impact of the proposed method on segmentation accuracy and topological representation in DSA images.

Main Methods:

  • A texture-based contrast enhancement framework was developed, fusing local contrast, entropy, and brightness threshold maps into a combined feature mask.
  • This feature mask was used as input for the nnU-Net deep learning model for segmentation.
  • Performance was evaluated on the DIAS dataset using metrics like Dice Similarity Coefficient (DICE) and Intersection over Union (IoU).

Main Results:

  • The proposed method achieved a DICE of 0.83 ± 0.20 and IoU of 0.72 ± 0.14, outperforming CLAHE and baseline methods.
  • Significant improvements in vessel connectivity (VC) and topological accuracy were observed, with VC dropping by over 65% relative to unprocessed images.
  • The texture-based preprocessing demonstrated robustness and noise tolerance compared to existing methods.

Conclusions:

  • Integrating texture-based preprocessing with nnU-Net substantially enhances intracranial artery segmentation from DSA.
  • The method provides robust, noise-tolerant, and clinically interpretable results, advancing neurovascular diagnostic capabilities.
  • This approach offers a significant improvement over traditional methods for vascular segmentation in medical imaging.