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Detection of Horizontal Gene Transfer Mediated by Natural Conjugative Plasmids in E. coli
Published on: March 24, 2023
[pELF-type linear plasmids and antimicrobial resistance in enterococci]
1Department of Bacteriology, Gunma University Graduate School of Medicine.
Abstract:
Enterococci, particularly Enterococcus faecium, are major opportunistic pathogens, and the spread of multidrug-resistant strains, especially vancomycin-resistant enterococci (VRE), is a serious public health concern. Conjugative plasmids are key drivers of antimicrobial resistance gene (ARG) dissemination in enterococci. Until recently, all such plasmids were assumed to be circular. Here, we summarize our studies on pELF-type linear plasmids, a novel family of enterococcal plasmids.We first identified pELF1, a linear plasmid that carries both VanA- and VanM-type vancomycin resistance gene clusters and characterized its hybrid terminal structure and its ability to cross species barriers within the genus Enterococcus, thereby disseminating ARGs. In a documented episode of nosocomial VRE transmission, we then showed that a pELF-type linear plasmid (pELF2) mediated interspecies transfer of vancomycin resistance gene clusters among E. faecium, E. raffinosus, and E. casseliflavus.Using integrated molecular epidemiological, phenotypic, and transcriptomic analyses, we demonstrated that pELF-type linear plasmids are globally distributed as multiple lineages that retain a conserved backbone while adapting to their E. faecium hosts, functioning as major vehicles for ARGs in E. faecium. More recently, we showed that pELF-type linear plasmids have evolved through the acquisition of transposons and a circular plasmid carrying linezolid resistance genes, leading to strains with concomitant resistance to vancomycin and linezolid in both clinical and environmental settings.These findings indicate that pELF-type linear plasmids play a crucial role in the development of multidrug resistance in E. faecium and underscore the importance of incorporating this plasmid family into surveillance and intervention strategies aimed at limiting antimicrobial resistance.
Insights
Novel linear plasmids, pELF-types, are spreading multidrug resistance in Enterococcus faecium. These plasmids facilitate the dissemination of vancomycin resistance genes and contribute to the rise of difficult-to-treat infections.
Area of Science:
- Microbiology
- Genetics
- Epidemiology
Background:
- Enterococci are significant opportunistic pathogens, with multidrug-resistant strains posing a major public health threat.
- Antimicrobial resistance gene (ARG) dissemination in enterococci is primarily driven by conjugative plasmids.
- Previously, enterococcal plasmids were exclusively considered circular, overlooking potential linear forms.
Purpose of the Study:
- To investigate the role of a novel family of linear plasmids, termed pELF-type, in the dissemination of antimicrobial resistance in enterococci.
- To characterize the structure, function, and epidemiological distribution of pELF-type linear plasmids.
- To understand the contribution of these plasmids to the emergence of multidrug-resistant Enterococcus faecium.
Main Methods:
- Molecular epidemiology
- Phenotypic analysis
- Transcriptomic analysis
- Plasmid identification and characterization
Main Results:
- Identification and characterization of pELF1, a linear plasmid with hybrid terminal structures conferring vancomycin resistance (VanA and VanM).
- Demonstration of pELF-type plasmids mediating interspecies transfer of vancomycin resistance genes between different enterococcal species.
- Evidence of global distribution of pELF-type linear plasmids in Enterococcus faecium, with conserved backbones and host adaptation.
- Discovery of pELF-type plasmids acquiring additional resistance genes, leading to vancomycin and linezolid co-resistance.
Conclusions:
- pELF-type linear plasmids are critical vehicles for ARG dissemination in Enterococcus faecium.
- These plasmids contribute significantly to the development of multidrug resistance in enterococci.
- The findings highlight the need to include pELF-type linear plasmids in surveillance and intervention strategies against antimicrobial resistance.
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