Rice varietal intercropping mediates resistance to rice blast (Magnaporthe Oryzae) through core root exudates
Guang-Yu Han1,2,3, Rong-Ping Li1, Xiao-Qiao Zhu1
1College of Plant Protection, Yunnan Agricultural University, Kunming, Yunnan, 650201, China.
BMC Plant Biology
|December 24, 2025
Summary
Intercropping rice varieties enhances disease resistance through root metabolites. Four key compounds, including azelaic acid and sebacic acid, were identified that activate plant defenses against rice blast.
Area of Science:
- Agricultural Science
- Plant Pathology
- Biochemistry
Background:
- Rice blast, caused by Magnaporthe oryzae, is a major threat to global rice production and food security.
- Intercropping rice varieties is a promising strategy for disease control, but the underlying mechanisms involving root interactions are not fully understood.
Purpose of the Study:
- To investigate the role of root interactions and root exudates in mediating rice blast resistance during intercropping.
- To identify specific metabolites involved in inducing defense responses in rice.
Main Methods:
- Field and greenhouse experiments involving intercropping of susceptible and resistant rice varieties.
- Transcriptome and metabolome profiling of root exudates.
- Correlation analysis to link metabolites with resistance-regulating genes.
- Functional validation of identified compounds.
Main Results:
- Intercropping enhanced disease resistance in both rice varieties, mediated by root-secreted metabolites that activated defense pathways.
- Metabolome profiling revealed changes in root exudates, with enrichment in flavonoid/phenylpropanoid biosynthesis and antifungal compounds.
- Four core compounds—azelaic acid (AzA), sebacic acid (SA), betaine (Bet), and phenyl acetate (PhAc)—were identified and linked to resistance.
Conclusions:
- Intercropping induces resistance in rice, even in susceptible varieties, through key root exudates.
- Azelaic acid and sebacic acid directly inhibited Magnaporthe oryzae growth.
- These findings elucidate the mechanisms of rice blast resistance in intercropping systems, highlighting the importance of root metabolite signaling.


