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Published on: May 30, 2025
Epitranscriptomic control of cancer hallmarks: Functions, mechanisms, and therapeutics of RNA modifications
Xiaolan Deng1, Dong Wu1, Yingqi Zhao2
1Department of Systems Biology, Beckman Research Institute of City of Hope, Duarte, CA 91010, USA; Center for RNA Biology and Therapeutics, Beckman Research Institute of City of Hope, Duarte, CA 91010, USA.
Abstract:
The epitranscriptome, comprising over 170 distinct RNA modifications, represents a dynamic and multifaceted layer of gene regulation. These chemical marks such as N6-methyladenosine (m6A), 5-methylcytosine (m5C), and pseudouridine (Ψ) modulate RNA processing, localization, stability, and translation, shaping cell identity and stress responses. In cancer, RNA modifications integrate with oncogenic signaling networks to influence cancer cell proliferation, metabolism, immune evasion, stemness, and therapeutic resistance. Recent advances in detection technologies, functional perturbation tools, and spatial profiling have accelerated our understanding of the epitranscriptome's roles and the underlying mechanisms in malignancies. In this review, we provide a mechanistic framework connecting RNA modifications and regulators to the hallmarks of cancer. We highlight emerging insights into the interface between epitranscriptomic regulators and canonical cancer pathways and evaluate their potential as biomarkers and therapeutic targets. Together, these findings underscore RNA modification as a pivotal regulatory axis in cancer biology and a promising frontier for translational intervention.
Insights
The epitranscriptome, or RNA modifications, plays a key role in cancer by influencing cell growth and treatment resistance. Understanding these RNA marks offers new avenues for cancer biomarkers and therapies.
Area of Science:
- Molecular Biology
- Cancer Biology
- Epigenetics
Background:
- The epitranscriptome comprises over 170 RNA modifications that regulate gene expression.
- Key modifications like m6A, m5C, and Ψ impact RNA processing, stability, and translation.
- These RNA marks are increasingly recognized for their roles in cellular identity and stress responses.
Purpose of the Study:
- To provide a mechanistic framework linking RNA modifications and regulators to cancer hallmarks.
- To highlight the interplay between epitranscriptomic regulators and cancer pathways.
- To evaluate the potential of epitranscriptomic regulators as cancer biomarkers and therapeutic targets.
Main Methods:
- Review of recent advances in epitranscriptome detection technologies.
- Analysis of functional perturbation tools and spatial profiling in cancer research.
- Integration of current knowledge on RNA modifications and cancer biology.
Main Results:
- RNA modifications are integrated with oncogenic signaling networks in cancer.
- Epitranscriptomic alterations influence cancer proliferation, metabolism, immune evasion, stemness, and drug resistance.
- Emerging insights reveal the interface between epitranscriptomic regulators and canonical cancer pathways.
Conclusions:
- RNA modification is a pivotal regulatory axis in cancer biology.
- The epitranscriptome presents a promising frontier for translational cancer intervention.
- Epitranscriptomic regulators hold potential as novel biomarkers and therapeutic targets for cancer.
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