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SF3B1 mutations in spliceosome-driven tumorigenesis: From splicing dysregulation to signaling network rewiring and
Ting Yang1, Rui Qian1, Xuanxuan Sun1
1China-Japan Union Hospital of Jilin University, Jilin University, Changchun 130033, Jilin, China.
Abstract:
Splicing factor 3B subunit 1 (SF3B1), a core component of the U2 small nuclear ribonucleoprotein, has key functions in precursor messenger RNA (pre-mRNA) splicing and regulates gene expression by recognizing branch point sequences and coordinating spliceosome assembly. Mutations of SF3B1 have been identified as high-frequency drivers in various tumor types. These include hotspot mutations such as K700E, which reshape the splicing factor network via abnormal interactions with SUGP1, DHX15, etc., resulting in activation of latent splicing sites. These changes in turn affect genes involved in RNA metabolism and the cell cycle and genomic stability, thereby triggering the downstream NF-κB, AKT, and p53 pathways to promote tumorigenesis. Clinically, SF3B1 mutations occur in both hematological tumors (as in myelodysplastic syndrome) and solid tumors (such as breast cancer). Mutation-mediated splicing abnormalities thus represent targets for new therapeutic agents such as spliceosome inhibitor pladienolide B. However, although studies have advanced our understanding of these abnormalities from basic splicing changes to effects on signaling networks and potential clinical translation, various aspects need further exploration; these include mutation-specific functional heterogeneity, interactions with the tumor microenvironment, and mechanisms of drug resistance. This review systematically summarizes the functions of SF3B1 mutations and their underlying molecular mechanisms in spliceosome-driven tumorigenesis, with the aim of providing a framework for better understanding of this process, as well as discussing prospects for new precision medicine diagnostic and treatment strategies.
Insights
Mutations in splicing factor 3B subunit 1 (SF3B1) drive tumor formation by altering gene expression and activating cancer pathways. Targeting these splicing defects offers new precision medicine strategies for cancer treatment.
Area of Science:
- Molecular Biology
- Cancer Genetics
- RNA Biology
Background:
- SF3B1 is crucial for pre-mRNA splicing and gene regulation.
- SF3B1 mutations are common in various cancers, including hematological and solid tumors.
- These mutations disrupt splicing, affecting RNA metabolism, cell cycle, and genomic stability.
Purpose of the Study:
- To systematically review SF3B1 mutation functions in spliceosome-driven tumorigenesis.
- To elucidate the molecular mechanisms underlying SF3B1-mediated cancer development.
- To discuss prospects for precision medicine strategies targeting SF3B1.
Main Methods:
- Literature review of studies on SF3B1 mutations in cancer.
- Analysis of molecular mechanisms linking SF3B1 mutations to tumorigenesis.
- Exploration of clinical implications and therapeutic strategies.
Main Results:
- SF3B1 mutations, like K700E, alter splicing factor networks and activate aberrant splicing.
- Altered splicing impacts key cellular processes and activates oncogenic pathways (NF-κB, AKT, p53).
- SF3B1 mutations are found in myelodysplastic syndrome and breast cancer, among others.
Conclusions:
- SF3B1 mutations are significant drivers of tumorigenesis through aberrant splicing.
- Targeting spliceosome dysfunction, e.g., with pladienolide B, shows therapeutic potential.
- Further research is needed on mutation heterogeneity, tumor microenvironment interactions, and drug resistance.
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