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Tuning Molecular Motors with tert-Butyl and Fluorinated tert-Butyl Groups
Ivan Tambovtsev1, Hannes Jónsson1
1Science Institute and Faculty of Physical Sciences, University of Iceland, 107 Reykjavík, Iceland.
The Journal of Physical Chemistry. A
|December 26, 2025
Summary
Modifying molecular motors with tert-butyl and fluorinated tert-butyl groups enhances their rotational speed. These structural changes also increase the separation of absorption peaks, aiding in the design of faster molecular motors.
Area of Science:
- Molecular chemistry
- Theoretical chemistry
- Materials science
Background:
- Second-generation molecular motors are crucial for nanoscale applications.
- Understanding substituent effects on rotor dynamics is key to optimizing motor performance.
Purpose of the Study:
- To theoretically investigate how modifying substituents in the rotor group affects the rotational speed of molecular motors.
- To explore the impact of tert-butyl (tBu) and fluorinated tBu groups on motor kinetics and photophysical properties.
Main Methods:
- Density functional theory (DFT) was used to calculate energy and atomic forces.
- Harmonic transition state theory (HTST) estimated the rate-limiting step (thermal helix inversion) and backward transitions.
- Calculations were compared with experimental half-life measurements for validation.
Main Results:
- Replacing a methyl group with a tert-butyl (tBu) group increased rotational speed by reducing the metastable state lifetime.
- Fluorinating the tBu group further accelerated the rotational rate without significant structural changes.
- Substitution increased the separation of absorption peaks for stable and metastable states by up to 40 nm.
Conclusions:
- Substituent modification, particularly with tBu and fluorinated tBu groups, offers a viable strategy to enhance molecular motor speed.
- These findings provide a basis for designing molecular motors with tailored rotational velocities for specific applications.
- The observed changes in photophysical properties suggest potential for light-driven control and tuning.
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