Development of a UPLC-MS/MS Method for Tracking Polymyxin B Dynamics in Soil Inoculated with Paenibacillus polymyxa

Siyu Huang1, Xiaorui Li1, Xin Lu1

  • 1National Key Laboratory of Intelligent Tracking and Forecasting for Infectious Diseases, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, China.

Biomolecules
|December 30, 2025
PubMed

Insights

Polymyxin B (PMB) in soil can be accurately measured using a new UPLC-MS/MS method. Applying the bacterium Paenibacillus polymyxa increases soil PMB, potentially posing ecological risks.

Area of Science:

  • Environmental Chemistry
  • Microbiology
  • Analytical Chemistry

Background:

  • Polymyxins, like polymyxin B (PMB), are crucial for treating multidrug-resistant Gram-negative infections.
  • Antibiotic residues in soil, from wastewater and manure, can drive the emergence of resistance.
  • The bacterium Paenibacillus polymyxa, used in agriculture, may contribute to soil polymyxin levels.

Purpose of the Study:

  • To develop and validate a reliable method for quantifying polymyxin B (PMB) in soil.
  • To investigate the impact of Paenibacillus polymyxa application on soil PMB concentrations.
  • To assess the ecological risk associated with soil PMB accumulation.

Main Methods:

  • Optimized solvent extraction and solid-phase extraction for improved PMB recovery from soil.
  • Developed and validated a UPLC-MS/MS method for sensitive and accurate PMB quantification.
  • Monitored soil PMB levels over 28 days following inoculation with varying doses of P. polymyxa.

Main Results:

  • The UPLC-MS/MS method demonstrated good linearity, low detection limits (0.86 ng/g), and quantification limits (2.12 ng/g).
  • Soil PMB concentrations increased in a dose-dependent manner with P. polymyxa inoculation, peaking at 14 days.
  • High P. polymyxa doses led to soil PMB levels approaching the high-risk threshold (RQ ≥ 1).

Conclusions:

  • A validated UPLC-MS/MS method enables accurate quantification of soil polymyxin B.
  • Application of Paenibacillus polymyxa can increase soil polymyxin B burden, raising ecological concerns.
  • Ecological risk assessment indicates potential risks at higher P. polymyxa application rates.