From Polymorphisms to Phenotypes: SMAD3 rs17293632 and LTBP3 rs11545200 in Pediatric Inflammatory Bowel Disease

Jan Brylak1, Mariusz Szczepanik1, Jan K Nowak1

  • 1Department of Pediatric Gastroenterology and Metabolic Diseases, Poznan University of Medical Sciences, 60-572 Poznan, Poland.

Genes
|December 30, 2025
PubMed

Insights

Genetic variants in SMAD3 and LTBP3 influence pediatric inflammatory bowel disease (IBD) severity. These findings may help tailor treatments for children with Crohn's disease (CD) and ulcerative colitis (UC).

Area of Science:

  • Genetics and Genomics
  • Pediatric Gastroenterology
  • Immunology

Background:

  • Early-onset inflammatory bowel disease (IBD), encompassing Crohn's disease (CD) and ulcerative colitis (UC), often exhibits a more severe clinical trajectory.
  • Genetic factors, particularly within the transforming growth factor-beta (TGF-β) signaling pathway, are critical in IBD pathogenesis.
  • SMAD3 and LTBP3 genes, integral to TGF-β signaling, have been previously linked to IBD through genome-wide association studies.

Purpose of the Study:

  • To investigate the clinical relevance of specific polymorphisms in SMAD3 (rs17293632) and LTBP3 (rs11545200) within a pediatric IBD cohort.
  • To correlate these genetic variants with clinical disease characteristics, including age at diagnosis, inflammatory markers, growth parameters, and treatment responses.

Main Methods:

  • A cohort of 286 pediatric patients (133 with UC, 153 with CD) was recruited from seven Polish pediatric centers.
  • Genotyping was performed for the SMAD3 rs17293632 and LTBP3 rs11545200 polymorphisms.
  • Clinical data collected included age at diagnosis, C-reactive protein (CRP) levels, albumin levels, weight, height, BMI Z-scores, and therapeutic interventions.

Main Results:

  • The minor allele of LTBP3 rs11545200 was significantly associated with earlier diagnosis, poorer nutritional status during flares, and increased infliximab use, especially in UC patients.
  • In CD patients, the SMAD3 rs17293632 major homozygous genotype correlated with higher systemic corticosteroid usage, indicating a potentially more severe or refractory disease phenotype.
  • These genetic variations within the TGF-β pathway are linked to distinct clinical presentations in pediatric IBD.

Conclusions:

  • Polymorphisms in LTBP3 and SMAD3 are associated with specific clinical features in pediatric IBD patients.
  • These genetic markers may serve as predictive biomarkers for disease severity and guide personalized treatment strategies in children with IBD.
  • Further research into TGF-β pathway genetics can enhance tailored therapeutic approaches for pediatric IBD.

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