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Shared genetic associations between CHA2DS2-VASc score and cardio-embolic stroke: Insights from mendelian
Kang Yuan1, Xianshu Huo1, Mengdi Xie1
1Department of Neurology, Affiliated Jinling Hospital, Medical School of Nanjing University, Nanjing, 210002, China.
Insights
This study found shared genetic links between the CHA2DS2-VASc score and cardio-embolic stroke (CES). These findings suggest common genetic factors influence both conditions, potentially involving immune responses.
Area of Science:
- Genetics
- Cardiovascular Medicine
- Neurology
Background:
- The CHA2DS2-VASc score predicts cardio-embolic stroke (CES) risk, hinting at shared genetic factors.
- Understanding these genetic links can improve risk assessment and identify therapeutic targets.
Purpose of the Study:
- To investigate the shared genetic associations between the CHA2DS2-VASc score and CES.
- To identify specific genetic loci, SNPs, and genes implicated in both conditions.
Main Methods:
- Utilized summary statistics from large-scale genome-wide association studies (GWAS) for 13 CHA2DS2-VASc score traits and CES.
- Employed linkage disequilibrium score regression (LDSC), cross-trait analysis, Mendelian randomization, colocalization, and gene-based association analyses.
Main Results:
- Significant genetic correlation was found between the CHA2DS2-VASc score and CES via LDSC and Mendelian randomization.
- Identified 9 potential shared loci and 13 significant independent SNPs through cross-trait and colocalization analyses.
- Nine genes were significant across multiple methods, with IL6R identified by all four, suggesting shared immune and inflammatory pathways.
Conclusions:
- The study confirms shared genetic associations between the CHA2DS2-VASc score and CES.
- Evidence supports a causal relationship, shared genetic loci, and genetic correlations between these conditions.
- IL6R emerges as a key shared gene, highlighting the role of immune responses in cardio-embolic stroke pathogenesis.
Abstract:
The CHA2DS2-VASc score is a risk assessment score to predict cardio-embolic stroke (CES), suggesting shared genetic susceptibility. This study aimed to explore the shared genetic association of genetically predicted CHA2DS2-VASc score and CES using multiple analytic frameworks. We conducted a comprehensive analysis of genetic data from 13 traits of CHA2DS2-VASc score and CES using summary statistics from large-scale genome-wide association studies (GWAS). We employed statistical methods such as linkage disequilibrium score regression (LDSC), cross-trait analysis, bidirectional Mendelian randomization, colocalization analysis and gene-based association analysis to explore genetic correlations and identify pleiotropic single nucleotide polymorphisms (SNPs) and shared genes. LDSC and Mendelian randomization analysis revealed a significant genetic correlation between CHA2DS2-VASc score and CES. Cross-trait and colocalization analysis identified 9 potential loci and 13 significant independent SNPs. Gene-based association analysis reported 9 genes significant across at least three methods, with IL6R being the shared gene identified by all four methods, highlighting potential shared biological mechanisms involving immune responses and inflammatory activities. In conclusion, our study revealed shared genetic associations between the genetically predicted CHA2DS2-VASc score and CES, which was supported by causal relationship, shared loci, and genetic correlation analyses.
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