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AutoPET Challenge on Fully Automated Lesion Segmentation in Oncologic PET/CT Imaging, Part 2: Domain Generalization.

Jakob Dexl1,2, Sergios Gatidis3,4, Marcel Früh3

  • 1Department of Radiology, LMU University Hospital, LMU Munich, Munich, Germany; jakob.dexl@med.uni-muenchen.de.

Journal of Nuclear Medicine : Official Publication, Society of Nuclear Medicine
|December 30, 2025
PubMed
Summary
This summary is machine-generated.

Machine learning models for PET/CT lesion segmentation struggle with domain generalization. The autoPET challenge showed that models trained on one data source perform poorly on diverse clinical data, highlighting the need for varied datasets.

Keywords:
PET/CTbiomedical image analysis challengedeep learningdomain generalizationoncologysegmentation

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Area of Science:

  • Medical Imaging
  • Artificial Intelligence in Medicine

Background:

  • Automated lesion segmentation in positron emission tomography/computed tomography (PET/CT) is crucial for cancer diagnosis and treatment monitoring.
  • The autoPET challenge aims to advance machine learning (ML) models for this task, focusing on real-world deployment challenges.

Purpose of the Study:

  • To evaluate the domain generalization capabilities of ML-based segmentation models trained on single-source PET/CT data.
  • To assess model performance across diverse clinical variations, including different institutions, pathologies, populations, and tracers.

Main Methods:

  • The second autoPET challenge involved training ML models on 1,014 whole-body 18F-FDG PET/CT scans.
  • Models were tested on 200 samples from 5 distinct clinical domains.
  • Performance was quantified using Dice Similarity Coefficient, false-positive volume, and false-negative volume.

Main Results:

  • Generalization from a single data source remains a significant challenge, with out-of-domain performance substantially deteriorating.
  • The best model achieved a Dice score of 0.5038, but performance dropped on pediatric and PSMA data.
  • Error analysis indicated issues with physiologic uptake and detection of small or low-uptake lesions.

Conclusions:

  • The autoPET challenge highlights the limitations of current automated PET/CT segmentation models in handling data variability.
  • There is a critical need for diverse, multi-domain public datasets to improve the robustness and clinical applicability of these algorithms.