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Structure-Aware Machine Learning for Polymers: A Hierarchical Graph Network for Predicting Properties From
Julian Kimmig1,2,3, Yannik Köster1,2, Timo Koswig1,2
1Laboratory of Organic and Macromolecular Chemistry (IOMC), Friedrich Schiller University Jena, Jena, Germany.
Abstract:
Machine learning applications in polymer science are often inefficient due to molecular representations that neglect the inherent hierarchical and statistical nature of macromolecules. This work introduces a structure-aware graph convolutional network (GCN) framework that addresses this limitation by treating polymer samples as statistical ensembles. The approach utilizes a hierarchical graph representation where nodes correspond to monomer units and explicitly integrates molecular mass distribution (MMD) data to account for sample dispersity. A key innovation is an ensemble-based training strategy using topologically realistic graphs generated on-demand via an optimized kinetic Monte Carlo simulation. The model's efficacy was validated on a broad range of tasks. On synthetic data, it achieved more than 98% accuracy in classifying complex polymer architectures. When applied to a large experimental dataset, the model predicts glass transition temperatures (Tg) with high accuracy (R2 = 0.89 ± 0.01). Crucially, a fine-tuning experiment demonstrated that the model could successfully learn the physically / chemically grounded relationship between Tg and molar mass by integrating MMD information. This work establishes a robust and physically realistic paradigm for polymer informatics, enabling more accurate property predictions and paving the way for accelerated in silico material design.
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