Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

MALDI-TOF Mass Spectrometry01:19

MALDI-TOF Mass Spectrometry

6.5K
Mass spectrometry is a powerful characterization technique that can identify and separate a wide variety of compounds ranging from chemical to biological entities, based on their mass-to-charge ratio (m/z). The instruments that allow this detection, known as mass spectrometers, have three components: an ion source, a mass analyzer, and a detector. These spectrometers differ based on the nature of their ion source and analyzers.Matrix-assisted laser desorption ionization (MALDI) is a commonly...
6.5K
High-Resolution Mass Spectrometry (HRMS)01:15

High-Resolution Mass Spectrometry (HRMS)

2.3K
The resolution of a mass spectrometer depends on the efficiency of separating ions with different ion masses. The mass of an atom is approximated to the sum of the masses of protons and neutrons inside, considering the masses of protons and neutrons as equal. However, the masses of the proton (1.6726 × 10−24 g) and neutron (1.6749 × 10−24 g) are not truly equal. There is a minor error in the expression of atomic masses relative to the simplest atom of hydrogen. For...
2.3K
Mass Spectrometry: Aromatic Compound Fragmentation01:23

Mass Spectrometry: Aromatic Compound Fragmentation

2.4K
Upon ionization, aromatic compounds generate a molecular ion that is observed as a prominent peak in their mass spectra. For example, the molecular ion peak for benzene appears at a mass-to-charge ratio of 78, while toluene is observed at a mass-to-charge ratio of 92. The molecular ion benzene is highly stable and does not readily undergo further fragmentation due to the significant amount of energy required to disrupt the aromatic stability of the benzene ring. In contrast, the molecular ion...
2.4K
Mass Spectrum: Interpretation01:24

Mass Spectrum: Interpretation

2.7K
An unknown compound can be established by identifying the molecular ion peak in the mass spectrum. The molecular ion peak is often weak or absent due to the predominance of fragmentation in high-energy electron beams. In such cases, a soft-energy electron beam can be used to scan the spectrum to enhance the intensity of the molecular ion peak. Additionally, chemical ionization, field ionization, and desorption ionization spectra are used to obtain a relatively intense molecular ion peak.To...
2.7K
Mass Spectrometry: Complex Analysis01:21

Mass Spectrometry: Complex Analysis

1.6K
Mass spectrometry is an important technique for the identification of pure compounds. However, it has some limitations for the analysis of complex mixtures, often due to excessive fragmentation making the spectrum too complicated to decipher. Mass spectrometry can be combined with suitable separation methods in sequence, forming hyphenated methods, which are useful in the analysis of complex mixtures.
GC–MS is a powerful hyphenated method commonly used in forensics and environmental...
1.6K
Mass Spectrometry: Overview01:19

Mass Spectrometry: Overview

8.2K
Mass spectrometry is an analytical technique used to determine the molecular mass and molecular formula of a compound. The basic principle of mass spectrometry is to generate ions from the analyte molecule and measure these ion abundances against their molecular mass. One common type of ionization, known as electron ionization or EI, bombards the analyte molecules in the gas phase with high-energy electron beams. The electron beams displace an electron from the molecule and leave behind a...
8.2K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Accelerating countermeasure candidate discovery for A-series chemical warfare agent exposure.

Proceedings of the National Academy of Sciences of the United States of America·2025
Same author

Pathogenic potential of polyextremotolerant fungi in a warming world.

PLoS pathogens·2025
Same author

Optimized vectors for genetic engineering of <i>Aureobasidium pullulans</i>.

Molecular biology of the cell·2025
Same author

Evaluation of Subetadex-α-methyl, a Polyanionic Cyclodextrin Scaffold, as a Medical Countermeasure against Fentanyl and Related Opioids.

ACS central science·2024
Same author

Toward Machine Learning-Driven Mass Spectrometric Identification of Trichothecenes in the Absence of Standard Reference Materials.

Analytical chemistry·2023
Same author

Peptide aptamer targeting Aβ-PrP-Fyn axis reduces Alzheimer's disease pathologies in 5XFAD transgenic mouse model.

Cellular and molecular life sciences : CMLS·2023

Related Experiment Video

Updated: Jan 13, 2026

Author Spotlight: An Efficient Methodology to Confidently Differentiate and Characterize Fentanyl Analogs
10:13

Author Spotlight: An Efficient Methodology to Confidently Differentiate and Characterize Fentanyl Analogs

Published on: November 8, 2024

2.8K

Random forest models accurately classify synthetic opioids using high-dimensionality mass spectrometry datasets.

Kourosh Arasteh1, Steven Magana-Zook2, Colin V Ponce3

  • 1Biosciences and Biotechnology Division, Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA 94550, USA. fisher77@llnl.gov.

Analytical Methods : Advancing Methods and Applications
|January 7, 2026
PubMed
Summary

Machine learning models, particularly random forest, accurately detect synthetic opioids versus non-opioids using mass spectrometry data. This advances untargeted screening for novel chemical threats in complex mixtures.

More Related Videos

Rapid High-throughput Species Identification of Botanical Material Using Direct Analysis in Real Time High Resolution Mass Spectrometry
11:14

Rapid High-throughput Species Identification of Botanical Material Using Direct Analysis in Real Time High Resolution Mass Spectrometry

Published on: October 2, 2016

12.1K
High-throughput and Comprehensive Drug Surveillance Using Multisegment Injection-Capillary Electrophoresis-Mass Spectrometry
10:17

High-throughput and Comprehensive Drug Surveillance Using Multisegment Injection-Capillary Electrophoresis-Mass Spectrometry

Published on: April 23, 2019

10.2K

Related Experiment Videos

Last Updated: Jan 13, 2026

Author Spotlight: An Efficient Methodology to Confidently Differentiate and Characterize Fentanyl Analogs
10:13

Author Spotlight: An Efficient Methodology to Confidently Differentiate and Characterize Fentanyl Analogs

Published on: November 8, 2024

2.8K
Rapid High-throughput Species Identification of Botanical Material Using Direct Analysis in Real Time High Resolution Mass Spectrometry
11:14

Rapid High-throughput Species Identification of Botanical Material Using Direct Analysis in Real Time High Resolution Mass Spectrometry

Published on: October 2, 2016

12.1K
High-throughput and Comprehensive Drug Surveillance Using Multisegment Injection-Capillary Electrophoresis-Mass Spectrometry
10:17

High-throughput and Comprehensive Drug Surveillance Using Multisegment Injection-Capillary Electrophoresis-Mass Spectrometry

Published on: April 23, 2019

10.2K

Area of Science:

  • Analytical Chemistry
  • Computational Chemistry
  • Forensic Science

Background:

  • Untargeted detection of unknown chemical structures, like novel synthetic opioids, is a significant challenge.
  • Machine learning (ML) offers potential for developing broad-spectrum analytical methods for threat agent identification.
  • Existing methods struggle with the vast and evolving landscape of potential chemical threats.

Purpose of the Study:

  • To develop and validate machine learning models for the untargeted classification of synthetic opioids.
  • To assess the efficacy of logistic regression and random forest algorithms using mass spectrometry data.
  • To establish a foundation for field-deployable analytical tools for emergent threat detection.

Main Methods:

  • Utilized nominal and high-resolution mass spectrometry data from hundreds of synthetic opioids and non-opioid compounds.
  • Trained and validated logistic regression and random forest machine learning models.
  • Evaluated model performance based on accuracy, false positive, and false negative rates.

Main Results:

  • Random forest models achieved over 95% validation accuracy in classifying opioids versus non-opioids.
  • Both nominal and high-resolution mass spectrometry data were effective with random forest.
  • The developed random forest models accurately predicted the classification of previously unseen compounds.

Conclusions:

  • Random forest models demonstrate high accuracy and low error rates for opioid detection using mass spectrometry.
  • ML-driven analysis is crucial for developing practical, field-deployable instruments for identifying emergent chemical threats.
  • This approach supports broad-spectrum screening of complex mixtures containing unknown threat agents.