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Random forest models accurately classify synthetic opioids using high-dimensionality mass spectrometry datasets.
Kourosh Arasteh1, Steven Magana-Zook2, Colin V Ponce3
1Biosciences and Biotechnology Division, Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA 94550, USA. fisher77@llnl.gov.
Machine learning models, particularly random forest, accurately detect synthetic opioids versus non-opioids using mass spectrometry data. This advances untargeted screening for novel chemical threats in complex mixtures.
Area of Science:
- Analytical Chemistry
- Computational Chemistry
- Forensic Science
Background:
- Untargeted detection of unknown chemical structures, like novel synthetic opioids, is a significant challenge.
- Machine learning (ML) offers potential for developing broad-spectrum analytical methods for threat agent identification.
- Existing methods struggle with the vast and evolving landscape of potential chemical threats.
Purpose of the Study:
- To develop and validate machine learning models for the untargeted classification of synthetic opioids.
- To assess the efficacy of logistic regression and random forest algorithms using mass spectrometry data.
- To establish a foundation for field-deployable analytical tools for emergent threat detection.
Main Methods:
- Utilized nominal and high-resolution mass spectrometry data from hundreds of synthetic opioids and non-opioid compounds.
- Trained and validated logistic regression and random forest machine learning models.
- Evaluated model performance based on accuracy, false positive, and false negative rates.
Main Results:
- Random forest models achieved over 95% validation accuracy in classifying opioids versus non-opioids.
- Both nominal and high-resolution mass spectrometry data were effective with random forest.
- The developed random forest models accurately predicted the classification of previously unseen compounds.
Conclusions:
- Random forest models demonstrate high accuracy and low error rates for opioid detection using mass spectrometry.
- ML-driven analysis is crucial for developing practical, field-deployable instruments for identifying emergent chemical threats.
- This approach supports broad-spectrum screening of complex mixtures containing unknown threat agents.
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