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Updated: Jan 13, 2026

Three-Dimensional Bone Extracellular Matrix Model for Osteosarcoma
Published on: April 12, 2019
AGPAT3 Regulates Immune Microenvironment in Osteosarcoma via Lysophosphatidic Acid Metabolism
Shenghui Su1, Yu Zeng1, Jiaxin Chen1
1JXHC Key Laboratory of Digital Orthopaedics, Jiangxi Provincial People's Hospital, The First Affiliated Hospital of Nanchang Medical College, Nanchang, 330006, China.
Background:
Recent studies have shown glycerolipid metabolism played an essential role in multiple tumors, however, its function in osteosarcoma is unclear. This study aimed to explore the role of glycerolipid metabolism in osteosarcoma.
Methods:
We conducted bioinformatics analysis using data from the Therapeutically Applicable Research to Generate Effective Treatments (TARGET) database and single-cell RNA sequencing. Least Absolute Shrinkage and Selection Operator (LASSO) regression was used to identify the Glycerolipid metabolism-related genes associated with the clinical outcome of osteosarcoma. Tumor-associated macrophages (TAMs) and their interactions with immune cells were examined through single-cell analysis and co-culture experiments. Virtual screening was employed to identify the potential lysophosphatidic acid receptor 6 (LPAR6) inhibitors.
Results:
Glycerolipid metabolism-related genes 1-acylglycerol-3-phosphate O-acyltransferase 3 (AGPAT3) and aldehyde dehydrogenase 7 family member A1 (ALDH7A1) were identified as key prognostic genes in osteosarcoma, with high AGPAT3 expression correlating with improved survival. Single-cell analysis revealed that AGPAT3 expression is associated with tumor immune microenvironment, particularly with TAMs. Knockdown of AGPAT3 in osteosarcoma cells resulted in elevated lysophosphatidic acid (LPA) levels, which regulated the immune environment, inhibiting cytotoxic T cell function through TAMs' LPAR6 signaling. LPAR6 signaling in TAMs mediates immune regulation through cytokine secretion, including interleukin-6 (IL-6) and interleukin-10 (IL-10). Further drug virtual screening identified Dutasteride as a potential inhibitor of LPAR6.
Conclusion:
AGPAT3 is an important gene related to the prognosis of osteosarcoma. Its ability to modulate LPA signaling and TAM activity offers promising therapeutic opportunities for improving osteosarcoma treatment, particularly in immunotherapy contexts.
Insights
Glycerolipid metabolism gene AGPAT3 impacts osteosarcoma prognosis and immune response. Targeting lysophosphatidic acid receptor 6 (LPAR6) signaling in tumor-associated macrophages (TAMs) offers new immunotherapy strategies for osteosarcoma.
Area of Science:
- Oncology
- Immunology
- Metabolism
Background:
- Glycerolipid metabolism is crucial in various cancers, but its role in osteosarcoma remains largely unexplored.
- Understanding these metabolic pathways is key to identifying novel therapeutic targets for osteosarcoma.
Purpose of the Study:
- To investigate the function of glycerolipid metabolism in osteosarcoma.
- To identify key genes and pathways involved in osteosarcoma progression and immune evasion.
Main Methods:
- Bioinformatics analysis of TARGET database and single-cell RNA sequencing data.
- LASSO regression to identify prognostic glycerolipid metabolism genes.
- Single-cell analysis and co-culture experiments to study tumor-associated macrophages (TAMs) and immune interactions.
- Virtual screening for lysophosphatidic acid receptor 6 (LPAR6) inhibitors.
Main Results:
- 1-acylglycerol-3-phosphate O-acyltransferase 3 (AGPAT3) and aldehyde dehydrogenase 7 family member A1 (ALDH7A1) identified as key prognostic genes; high AGPAT3 expression correlates with better survival.
- AGPAT3 expression is linked to the tumor immune microenvironment, particularly TAMs.
- AGPAT3 knockdown increases lysophosphatidic acid (LPA) levels, impairing T cell function via TAM LPAR6 signaling and altering cytokine secretion (IL-6, IL-10).
- Dutasteride identified as a potential LPAR6 inhibitor.
Conclusions:
- AGPAT3 plays a significant role in osteosarcoma prognosis and immune modulation.
- Targeting LPA signaling and TAM activity, specifically through LPAR6, presents a promising therapeutic avenue for osteosarcoma, especially in combination with immunotherapy.
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