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Updated: Jan 13, 2026

Yeast As a Chassis for Developing Functional Assays to Study Human P53
Published on: August 4, 2019
Acquired On-Target Alterations Drive Clinical Resistance to p53-Y220C Reactivators
Ferran Fece de la Cruz1, Andreas Varkaris1, Parasvi S Patel1
1Massachusetts General Hospital Cancer Center, Department of Medicine, Harvard Medical School, Boston, Massachusetts.
Abstract:
The tumor-suppressor TP53 is the most frequently altered gene in cancer, and the Y220C hotspot, found in 1.8% of TP53-mutant tumors, creates a druggable cavity that destabilizes p53. Rezatapopt, a first-in-class, orally bioavailable reactivator of Y220C-mutant p53, has demonstrated promising initial efficacy in the phase 1/2 PYNNACLE trial. We report the first clinical mechanisms of resistance to this therapeutic class. Profiling of circulating tumor DNA, tumor biopsies, and rapid autopsy specimens upon rezatapopt progression revealed multiple heterogenous secondary TP53 alterations in cis with Y220C, including (i) DNA-binding domain mutations or frameshift/nonsense mutations that abolish transcriptional activity and (ii) mutations within the Y220C-binding surface predicted to hinder drug binding. Functional modeling confirmed that these double mutants eliminate p53 reactivation and target gene induction by rezatapopt. These findings establish a molecular framework for resistance to p53 Y220C reactivators and inform strategies to overcome resistance with next-generation agents.
Significance:
This study illustrates how pan-cancer resistance to Y220C-mutant p53 reactivators emerges in patients, indicating that on-target acquired alterations can represent a major mechanism of clinical resistance. These insights establish a molecular basis for therapeutic failure and provide a framework for developing next-generation agents to overcome resistance. See related commentary by Liu and Gu, p. 620.
Insights
Resistance to Y220C-mutant p53 reactivators like rezatapopt emerges through secondary TP53 mutations. These mutations hinder drug binding and abolish p53 reactivation, impacting cancer therapy effectiveness.
Area of Science:
- Oncology
- Molecular Biology
- Drug Development
Background:
- The TP53 gene is frequently altered in cancer, with the Y220C mutation creating a targetable cavity.
- Rezatapopt is a novel therapeutic agent designed to reactivate Y220C-mutant p53.
Purpose of the Study:
- To investigate the clinical mechanisms of resistance to Y220C-mutant p53 reactivators.
- To identify secondary genetic alterations conferring resistance to rezatapopt.
Main Methods:
- Profiling of circulating tumor DNA, tumor biopsies, and autopsy specimens.
- Functional modeling of TP53 double mutants.
- Analysis of resistance mechanisms in patients treated with rezatapopt.
Main Results:
- Identified heterogeneous secondary TP53 alterations in cis with Y220C upon rezatapopt progression.
- These alterations include mutations in the DNA-binding domain and within the Y220C binding surface.
- Functional studies confirmed these double mutations abolish p53 reactivation and target gene induction by rezatapopt.
Conclusions:
- Established a molecular framework for resistance to p53 Y220C reactivators.
- Findings inform strategies for developing next-generation agents to overcome resistance.
- Understanding resistance mechanisms is crucial for optimizing TP53-targeted cancer therapies.
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