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Updated: Jan 13, 2026

Evidence-based Knowledge Synthesis and Hypothesis Validation: Navigating Biomedical Knowledge Bases via Explainable AI and Agentic Systems
Published on: June 13, 2025
A machine learning and explainable AI framework for adsorption energy prediction via effective representation of the
Mohammadreza Karamad1,2, Aditya Biswas1
1Department of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, British Columbia V5A 1S6, Canada.
Abstract:
Adsorption energies, which capture the interactions between adsorbates and solid surfaces, are central to heterogeneous catalysis. Machine learning (ML) offers a powerful approach for rapidly and accurately predicting adsorption energies from computational data, thereby accelerating catalyst screening. The effectiveness of ML models depends on accurately representing the chemical environments of atoms, incorporating both geometric and electronic properties that influence adsorbate-surface interactions. In this study, we present an ML framework that leverages advanced electronic structure descriptors via Gaussian Multipole (GMP) featurization. GMP approximates electron density using Gaussian basis functions, providing a novel representation of elemental identity. Combined with robust geometric features, our model predicts CO and H binding energies (ΔECO∗ and ΔEH∗) on multimetallic alloys, achieving mean absolute errors of 0.07 eV for ΔECO∗ and 0.06 eV for ΔEH∗. To interpret the model's predictions, we applied Shapley additive explanations, a post hoc explainable artificial intelligence (XAI) method. The analysis revealed that GMP features associated with adsorbates and their first-nearest neighbors (FNNs) played the most significant role in determining binding energies, while features from second-nearest neighbors had minimal influence. In addition, broader elemental properties such as boiling point, group number, and atomic number were found to be more predictive of adsorption behavior than conventional features, such as electronegativity. Clustering and t-SNE analyses showed that similar FNN environments yield consistent binding energies, supporting the model's ability to generalize. Overall, this work demonstrates that integrating electronic structure features with explainable AI improves both predictive accuracy and interpretability, offering a powerful strategy for accelerated catalyst screening and rational catalyst design.
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