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Updated: Jan 13, 2026

Protocol for Three-dimensional Confocal Morphometric Analysis of Astrocytes
Published on: December 11, 2015
A 3D Astrocyte Microenvironment Model Enables Rapid Ca2 +-Resolved Analysis and Therapeutic Modulation of Oxidative
Ju-Kang Kim1, Ye-Ji Kim1,2, Seyoung Ryu3,2
1Center for Global Biopharmaceutical Research, Korea Institute of Toxicology, Daejeon, Republic of Korea.
None:
Astrocytes orchestrate key neuroinflammatory processes, yet conventional two dimentional (2D) cultures distort Ca2+signaling and elevate inflammatory noise. Here, we introduce the Astrocytic Reactive-Calcium 3D microenvironment (ARC-3D), a tunable methacrylated gelatin (GelMA)-based 3D astrocyte microenvironment that enables stable long-term culture, improved transcriptional fidelity, and rapid Ca2+-resolved functional assessment under perfusion. The optimized 3.5 wt% matrix supported quiescent, structurally mature astrocytes and markedly reduced the inflammatory baseline observed in 2D systems. Upon oxidative stimulation with H2O2, ARC-3D recapitulated hallmark features of reactive astrogliosis, including elevated basal Ca2+ levels, impaired receptor-evoked Ca2+ transients, induction of GFAP and MAO-B, and secretion of IL-6 and IL-1β, captured at second-to-minute timescales. Treatment with KDS12025, an H2O2-scavenging MAO-B modulator, partially restored Ca2+ homeostasis, suppressed Ca2+-dependent cytokines, and selectively recovered gliogenic and metabolic signatures in transcriptomic analysis. In vivo intracerebroventricular H2O2 challenge validated the ARC-3D pathological trajectory and therapeutic modulation, highlighting strong in vitro-in vivo concordance. Collectively, ARC-3D offers a mechanistically precise, Ca2+-resolved, and translationally aligned platform for decoding oxidative neuroinflammation and for advancing astrocyte-targeted therapeutic strategies.

