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Updated: Jan 13, 2026

Brain Infarct Segmentation and Registration on MRI or CT for Lesion-symptom Mapping
Published on: September 25, 2019
Characterizing the effects of noncontrast head CT reconstruction kernel and slice thickness parameters on the
Spencer H Welland1,2, Grace Hyun J Kim1,2, Anil Yadav1,3,4
1David Geffen School of Medicine at UCLA, Los Angeles, California, United States.
Purpose:
There are multiple commercially available, Food and Drug Administration (FDA)-cleared, artificial intelligence (AI)-based tools automating stroke evaluation in noncontrast computed tomography (NCCT). This study assessed the impact of variations in reconstruction kernel and slice thickness on two outputs of such a system: hypodense volume and Alberta Stroke Program Early CT Score (ASPECTS).
Approach:
The NCCT series image data of 67 patients imaged with a CT stroke protocol were reconstructed with four kernels (H10s-smooth, H40s-medium, H60s-sharp, and H70h-very sharp) and three slice thicknesses (1.5, 3.0, and 5.0 mm) to create 1 reference condition (H40s/5.0 mm) and 11 nonreference conditions. The 12 reconstructions per patient were processed with a commercially available FDA-cleared software package that yields total hypodense volume (mL) and ASPECTS. A mixed-effect model was used to test the difference in hypodense volume, and an ordered logistic model was used to test the difference in e-ASPECTS.
Results:
Hypodense volume differences from the reference condition ranged from to 1.1 mL and were significant for all nonreference kernels (H10s , H60s , and H70h ) and for thinner slices (1.5 mm and 3.0 mm ). e-ASPECTS was invariant to the nonreference kernels and slice thicknesses, with a mean difference ranging from to 0.5. No significant differences were found for any kernel or slice thickness (all ).
Conclusions:
Automated hypodense volume measured with a commercially available, FDA-cleared software package is substantially impacted by reconstruction kernel and slice thickness. Conversely, automated ASPECTS is invariant to these reconstruction parameters.
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