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A two-stage joint modeling approach for multiple longitudinal markers and time-to-event data
Taban Baghfalaki1,2, Reza Hashemi3, Catherine Helmer2
1Department of Mathematics, The University of Manchester, Manchester, UK.
We developed a novel two-stage Bayesian approach to jointly model multiple longitudinal markers and time-to-event outcomes, overcoming computational challenges. This method improves prediction model accuracy with numerous markers, even with informative dropout.
Area of Science:
- Biostatistics
- Clinical Data Analysis
- Longitudinal Data Modeling
Background:
- Joint modeling of longitudinal markers and time-to-event data is crucial in clinical studies.
- Increasing marker numbers lead to computational challenges and convergence issues in standard joint models.
Purpose of the Study:
- Propose a novel two-stage Bayesian approach for joint modeling of multiple longitudinal markers and time-to-event outcomes.
- Address computational intractability and bias due to informative dropout in complex clinical datasets.
Main Methods:
- A two-stage Bayesian approach: Stage 1 estimates one-marker joint models, predicting marker trajectories and avoiding informative dropout bias.
- Stage 2 fits a proportional hazards model using predicted marker values/slopes as time-dependent covariates.
- Employs multiple imputation to handle uncertainty in first-stage predictions for survival model estimation.
Main Results:
- The proposed method successfully handles a large number of longitudinal markers, overcoming computational limitations of conventional multi-marker joint models.
- Validated through simulation studies and application to the PBC2 dataset.
- Demonstrated effectiveness in predicting dementia risk using a dataset with seventeen longitudinal markers.
Conclusions:
- The novel two-stage Bayesian method offers a computationally feasible solution for joint modeling with numerous longitudinal markers.
- Facilitates the development of robust prediction models in complex clinical research settings.
- An R package, TSJM, is available to support the practical application of this approach.
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