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Mod-SE(2): a geometric deep learning framework for brain tumor classification and segmentation in MRI images.

Clara Lavita Angelina1,2,3, Fu-Ren Xiao3,4, Sunil Vyas3,5

  • 1Graduate School of Engineering Science and Technology, National Yunlin University of Science and Technology, Yunlin, 64002, Taiwan.

Journal of Biomedical Science
|January 13, 2026
PubMed
Summary

This study introduces Mod-SE(2), a geometric deep learning framework for brain tumor classification and segmentation. It significantly improves accuracy and efficiency compared to traditional CNNs, aiding in diagnosis and treatment planning.

Keywords:
Brain tumor classificationGeometric deep learningMRIMedical imagingMod-SE(2)Roto-translation invariance

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Area of Science:

  • Medical Imaging
  • Artificial Intelligence
  • Computational Neuroscience

Background:

  • Accurate brain tumor classification and segmentation are crucial for patient diagnosis and treatment.
  • Heterogeneous tumor morphology presents significant challenges for traditional Convolutional Neural Networks (CNNs).
  • CNNs often lack rotational and translational invariance, limiting their performance on diverse MRI data.

Purpose of the Study:

  • To introduce a novel geometric deep learning framework, Modified Special Euclidean (Mod-SE(2)), for enhanced brain tumor analysis.
  • To improve spatial consistency and reduce data augmentation dependency in tumor classification and segmentation.
  • To leverage geometric priors and symmetry-preserving group convolutions for robust medical image analysis.

Main Methods:

  • Developed the Mod-SE(2) framework integrating geometric priors and symmetry-preserving group convolutions.
  • Applied Mod-SE(2) to tumor classification (Mod-Cls-SE(2)) and segmentation (Mod-Seg-SE(2)) tasks.
  • Evaluated performance on multiple MRI and medical image datasets, benchmarking against U-Net, NN U-Net, VGG16, VGG19, and ResNet.

Main Results:

  • Mod-Cls-SE(2) achieved an average classification accuracy of 0.914, surpassing ResNet101 (0.682) and VGG16 (0.705).
  • Mod-Seg-SE(2) attained a Dice coefficient of 0.9503 and IoU of 0.9616 on BraTS2020, outperforming U-Net (0.797) and NN U-Net (0.815).
  • The model demonstrated reduced inference time and strong computational performance.

Conclusions:

  • Mod-SE(2) enhances spatial consistency, efficiency, and interpretability in brain tumor analysis through its symmetry-aware design.
  • The framework generalizes better across varying tumor shapes, outperforming traditional methods in key metrics.
  • Mod-SE(2) supports precise boundary delineation for neurosurgical planning and other clinical applications.