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Related Experiment Video

Updated: Jan 15, 2026

Capturing Chromosome Conformation Across Length Scales
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Cloneable contrast across all biological length scales.

Kanda M Borgognoni1, Bradley F Guilliams2, Zachary J Butz2

  • 1Department of Chemistry, Colorado State University, Fort Collins, CO, USA; National Institute of Environmental Health Sciences, Durham, NC, USA.

Journal of Structural Biology
|January 13, 2026
PubMed
Summary

Researchers developed a cloneable Selenium NanoParticle (cSeNP) for biological imaging. This cSeNP provides molecular contrast across electron microscopy, fluorescence microscopy, and X-ray computed tomography, enabling multi-scale biological studies.

Keywords:
Cell imagingCloneable selenium nanoparticle tagCorrelative light and electron microscopy and X-ray tomographyElectron tomography/microscopyIn situ electron contrastProtein tagging

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Area of Science:

  • Biophysics
  • Microscopy
  • Nanotechnology

Background:

  • Cloneable contrast agents like Green Fluorescent Protein (GFP) are vital for fluorescence microscopy.
  • A lack of similar cloneable agents exists for biological electron microscopy.
  • Existing methods struggle to provide contrast across all biological length scales.

Purpose of the Study:

  • To report a novel cloneable Selenium NanoParticle (cSeNP) for molecular contrast in biological imaging.
  • To demonstrate the utility of cSeNP across multiple imaging modalities, including electron microscopy, fluorescence microscopy, and X-ray computed tomography.
  • To enable imaging from subcellular structures to whole organisms.

Main Methods:

  • Development of a protein-conjugated, ~5 nm diameter Selenium Nanoparticle (cSeNP).
  • Fusion of DNA encoding cSeNP protein with DNA encoding FtsZ, a bacterial tubulin analog.
  • Expression of FtsZ-cSeNP fusion proteins in Escherichia coli and subsequent analysis via transmission electron tomography and fluorescence light microscopy.
  • X-ray computed tomography was used to assess contrast in E. coli.

Main Results:

  • cSeNPs exhibit high contrast in electron microscopy due to their electron density.
  • Experiments confirmed cSeNP localization correlating with known FtsZ filament positions in E. coli.
  • Less than 5% of cSeNPs were found in unexpected locations.
  • X-ray imaging demonstrated distinguishable contrast from background noise.

Conclusions:

  • The cSeNP serves as a versatile, cloneable imaging contrast agent.
  • It facilitates the location and correlation of proteins across all biological length scales.
  • This is particularly advantageous for electron microscopy, bridging the gap with larger-area imaging techniques like fluorescence microscopy.