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Machine Learning-based Diagnostic Potential of Bipolar Disorder Using Gut Microbiota Signatures
Hang Li1,2, Yan-Ting Jin3, Dong-Xin Ye4
1Center for Robotics, University of Electronic Science and Technology of China, Chengdu, China.
IET Systems Biology
|January 14, 2026
Summary
Bipolar disorder (BD) is linked to gut microbiome changes. Machine learning models using these gut bacteria biomarkers show promise for noninvasive BD diagnosis and understanding the microbiota-gut-brain axis.
Area of Science:
- Microbiome research
- Psychiatric disorders
- Computational biology
Background:
- Bipolar disorder (BD) is a chronic illness with significant cognitive and social impairments.
- The gut microbiota-gut-brain axis is increasingly implicated in BD pathophysiology.
- Diagnostic and therapeutic strategies for BD require further development.
Purpose of the Study:
- Investigate gut microbial alterations in BD patients.
- Evaluate the diagnostic potential of gut microbiota using machine learning.
- Identify microbial biomarkers for BD noninvasive diagnosis.
Main Methods:
- 16S rRNA sequencing to analyze gut microbial composition and diversity.
- Machine learning algorithms, including random forest (RF), for classification.
- PICRUSt2 for functional prediction of microbial pathways.
- Feature selection methods to identify optimal microbial biomarkers.
Main Results:
- Reduced alpha-diversity and altered beta-diversity observed in BD patients compared to healthy controls (HC).
- RF classifier achieved high diagnostic performance (AUC=0.9316) using 35 microbial biomarkers.
- Functional analysis revealed altered pathways in neurodegeneration, lipid metabolism, and heme biosynthesis.
- Combined compositional and functional features further improved diagnostic accuracy (AUC=0.9499).
Conclusions:
- Significant compositional and functional gut microbial disturbances are present in BD.
- Machine learning-based microbiome analysis offers a promising approach for noninvasive BD diagnosis.
- Identified markers provide insights into the microbiota-gut-brain axis, supporting precision psychiatry and microbiome-targeted interventions.
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